Gene CPS_4004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4004 
Symbol 
ID3518380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp4202066 
End bp4202656 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content39% 
IMG OID637286450 
ProductTetR family transcriptional regulator 
Protein accessionYP_270662 
Protein GI71278787 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.638592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAT CTCCCAAAAA AAAGCGGTTA CCACGTGGTC AAGGACGAGA ACGTATTTTA 
TCTTCGGCTG CAGATCTATT TTTGAAAAAT GGCTTTGAAG CAACCAGTCC TCAAGCAATT 
TATGCGGCAA GTGGTGTCGG GCAAGGAAGT TTTTACCATC ATTTTGCCAG TAAAGATGAT 
TTGGCAAATG CAGTTTTGGA AAGAATAGTA GAAGAAAAAA CCGCTGAATT AAATCACATT 
ACGAGCACTA TACCTAATCC AAAGAAGCGT TTAGAGGCAT ACCTAAAATT ACCTCGCAAA 
GGAACCGAAG GCTGCAAATT TGGGCGTTTC ATGTATGAGA CTTCAGGGCA AAAACAGCAA 
TTAAATAAAC CTATTCAAGG ATTCTTTGAT GAACTGCAGC GCTTTCTCAG TCATAACTTT 
CAGACAGCGC AAAACCAAGG ATTAATTTCA TCAGATTTCT CTGCCCAAGA GTTAAGTTCT 
ATTCTGATGG AACAAGTACA AGGTGGATAT ATAATGTCGA GGATCTATCA AAGTGATGAT 
CTCCAAGTTA ATACACTGAA ACGTCTGGCG AAACAATTAG GATTAACGTA G
 
Protein sequence
MSESPKKKRL PRGQGRERIL SSAADLFLKN GFEATSPQAI YAASGVGQGS FYHHFASKDD 
LANAVLERIV EEKTAELNHI TSTIPNPKKR LEAYLKLPRK GTEGCKFGRF MYETSGQKQQ 
LNKPIQGFFD ELQRFLSHNF QTAQNQGLIS SDFSAQELSS ILMEQVQGGY IMSRIYQSDD 
LQVNTLKRLA KQLGLT