| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3952 |
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| Symbol | |
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| ID | 3520743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4134704 |
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| End bp | 4136488 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637286398 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_270610 |
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| Protein GI | 71280278 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.173157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACTCA ATAATTTCTT TGCAGAGAAC AAAATGGTTG ATACAAAAAA TAATGGCGAA
GAAAGAAAAA AACTGATTTA TGCTGGGCAA ATGCACCTTG TTCATTGGCT AATTGTGTTG
CTATCAGTAG TGTTAACGTT TGGTGCTTGG TATTATTCAA AATCTCAATT TAATCAAAAA
CTAGAAGATA AATTTCAACG TAATGCTGAA CAAGTCGTTA GTTTAGTAAA AGAGAGAATG
CAACTCTATG AAAATGCACT GTGGAGTTCG GTAGCATATA TTGATGCTGA TGAGACTGAT
ATCACTCATA CCAAATGGTT AGCTTATTCA AAGAGTCTAA AAATAGATTT AACGTACCCT
GGTATTAATG GTATAGGTAT TATATATAAT ATTCAGGCGG ATCAACTTGA TGATTATATA
GAAAAACAAC GGGTGCTTAG GCCAAACTAT GCAATACACC CCAGCCATAA TGAATCCGAG
TATTGGCCCA TTACTTATGT TGAACCAGCA GCCCCTAATA AGAAAGCTAT AGGGCTTGAT
ATGGCCTTTG AAACCAACAG ATATTCATCA ATTAAAAAAG CGCGAGATAC AGGAGTCGCT
CAATTAACAG GACCAATTAC CTTAGTACAA GATGCTAAAA AAACGCCTGG TTTTCTGTTT
TATACCCCTT TTTATAAAAA TGGTACTAAG CCTGAAAGTA CTGAGGCGAG AAGAGACGCT
ATTGACGGTG TAACTTACGC GCCTTTTATA ATGAAAAATT TAATGCAGGG AACTTTAGCT
GAAAAAAATA GGCATGTAAG TATTCAAATA CGTGATGCTG GCGATTTGCT CTTTGATGAT
CATGACGACG AAAGTGTACT TGACGCGGAC GCTAATCCTT TATTTACCAA AGAACAGGAC
ATTTCATTAT ATGGTCGTAC ATGGTCATTC ACTATTCAAT CTAATCTAGA TTTTAGAGAT
GAGTCAGCAG CTAATCAATC GTCATTTATT TTAATGGGAG GTTTAGTGAT AGATGCCTTA
TTACTTGGCC TTTTTCTCTT TTTATCGCGA GCTAATCGGC AGGCCTTAGC TTATGCTGAT
CACATGACCC ATGCGCTGGA AGAAAAAACA ATTCATTTAG AAAAATCAAA TAGTGATTTA
GAACAATTCT CTTATGTTGC TTCTCATGAT CTTAAATCGC CTCTTAATGC GATTAAACAA
TTGGTTGGTT GGATAGCCGA AGATTGCCAA GACATTATTC CAGATGAATC AAAAAAGCAT
TTAGCCTTGT TAGCTCAACG AAGCGATCGA ATGATGAAGC TACTTAATGA TTTGCTAGAT
TATTCACGTA TTAATCGAAG TGAATTTAAA AGTGAACTTG TCAATTTAAA TGAAATGAGC
ATCGATATTC TCCATTTGAT AGACAAGCCC CCTGGATTCA ATATCTCCGC ACCAGATATT
GAAATAATGA TCCCCAGAGC TCCGTTTGAG ATAGTCCTTA GAAACTTAAT TTCAAATTCA
ATAAAGCATC ACGATGAAAA AAGTGGCTAT GTGCGTATTT CATGCAAAAG CAGTTCTGAT
TATCACGTAA TAACGGTAGA GGATGATGGT CCTGGCATTC CTGAAAAATT TCATGATAAA
GCGATGGAGA TGTTTCAAAC ACTAAAATCT AGAGATAAAG TCGAAGGTAG TGGTATGGGA
TTGGCAATGA TAAAACGAGT TACTGAACAT TATCAGGGGA GCATTTCAAT TGTTTCTGAT
GGACAACGTG GAACAAAAGT AATTATTCAT TGGCCGAAAT CATAA
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| Protein sequence | MKLNNFFAEN KMVDTKNNGE ERKKLIYAGQ MHLVHWLIVL LSVVLTFGAW YYSKSQFNQK
LEDKFQRNAE QVVSLVKERM QLYENALWSS VAYIDADETD ITHTKWLAYS KSLKIDLTYP
GINGIGIIYN IQADQLDDYI EKQRVLRPNY AIHPSHNESE YWPITYVEPA APNKKAIGLD
MAFETNRYSS IKKARDTGVA QLTGPITLVQ DAKKTPGFLF YTPFYKNGTK PESTEARRDA
IDGVTYAPFI MKNLMQGTLA EKNRHVSIQI RDAGDLLFDD HDDESVLDAD ANPLFTKEQD
ISLYGRTWSF TIQSNLDFRD ESAANQSSFI LMGGLVIDAL LLGLFLFLSR ANRQALAYAD
HMTHALEEKT IHLEKSNSDL EQFSYVASHD LKSPLNAIKQ LVGWIAEDCQ DIIPDESKKH
LALLAQRSDR MMKLLNDLLD YSRINRSEFK SELVNLNEMS IDILHLIDKP PGFNISAPDI
EIMIPRAPFE IVLRNLISNS IKHHDEKSGY VRISCKSSSD YHVITVEDDG PGIPEKFHDK
AMEMFQTLKS RDKVEGSGMG LAMIKRVTEH YQGSISIVSD GQRGTKVIIH WPKS
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