Gene CPS_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3938 
Symbol 
ID3523045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4121831 
End bp4123027 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content36% 
IMG OID637286384 
Producthypothetical protein 
Protein accessionYP_270596 
Protein GI71282570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTTTTT CATCATCATC TTTTTCAGCT GATGATGAAG CACTAATAAA AAAAGTTAAT 
CAATTAGAAA AAGAAATACA GGCGCTAAAA GATTCAGTTA ACTCTGCTGA TAGTGAAGTA
GAGTTAACAG TAGATAAAAA AGAAGATACG GGTATTAAGT TAGGTGGGGC AGTCCGCTTT
CAGTATTCTT ATGAAGACTA TAATGATGAT AATACTAGCC GAGGAGGCGA TTTAGATTTT
GATGTTTTCC GTCTTGATTT AAATGGTGAA GTTGGCGGGG TAATTTTATC TGCTCAATAT
CGCTGGTTTC AATACATGAA TGTAATTCAT CATGCTTGGG CCGGTTATGA TTTTGATGAA
AAATGGCAAG GTCAAATAGG TATAACACGT GTGCCATTTG GTAACTTGAA CTACAACTCA
CATAATTACT TTTTTAGTAG TAATTATTAT GTTGGTTTAG AAGATGATTA TGATGCGGGT
ATAAAGTTTA TTAGAAAAAC TGATGAACAT GATTTAAGGA TCGCTTTTTT CTTTACTGAT
GAAATGGGCG GCATCGATGG CTACGTAGAT GATAGATCAG ATCGATACTC TTACGATATT
GTTGGTGTTC GTGCTAATGA TGAAGGTATT TATGACGAAC CTGACAATGC AGCTGCCGAG
CATAATACAA TAAGTTTACG TTATGCCTAT CAGTTATCGA ATGTTGAACT GGGCTTCTCT
TACTTAAGCG GTGATTTGCG TGACTCAAGC TCATCCATAG GTGAACGAAC TGCTTATGCG
ATACACAGTG ATGCACAATT TGATCGTTGG AACGTAAAGC TACAATATAC CGACTATGAG
TATGATTTTG ATGAATACTC GCCCTCCATT GCGGTTGGAG CTTACAGTTT TTATGATTCC
ATTCCAAGTG AAGCCAAGCT TTATACTGTT AATGTTGCCT ACTTACAACC TGTTGAGTTT
GGACCTATTA CCTCATTAAA TTTTTATAAT AATTATAATT TGATGACAGA TAAGTCGGGC
GACTTTAATA ATGACACTAT TATGAACGTC TTGGGCGTCG CTATTTCAGC GGGTGGACTT
TATACCTACG TTGATTTGGT TAGAGCAAAA AATCAGCCAT TTGTCGGTGG CACCATGGCA
GGCGATAGTG ATGACTGGCA AACAAGATTT AATATTAATT TTGGTTATTA TTTTTAA
 
Protein sequence
MCFSSSSFSA DDEALIKKVN QLEKEIQALK DSVNSADSEV ELTVDKKEDT GIKLGGAVRF 
QYSYEDYNDD NTSRGGDLDF DVFRLDLNGE VGGVILSAQY RWFQYMNVIH HAWAGYDFDE
KWQGQIGITR VPFGNLNYNS HNYFFSSNYY VGLEDDYDAG IKFIRKTDEH DLRIAFFFTD
EMGGIDGYVD DRSDRYSYDI VGVRANDEGI YDEPDNAAAE HNTISLRYAY QLSNVELGFS
YLSGDLRDSS SSIGERTAYA IHSDAQFDRW NVKLQYTDYE YDFDEYSPSI AVGAYSFYDS
IPSEAKLYTV NVAYLQPVEF GPITSLNFYN NYNLMTDKSG DFNNDTIMNV LGVAISAGGL
YTYVDLVRAK NQPFVGGTMA GDSDDWQTRF NINFGYYF