Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3938 |
Symbol | |
ID | 3523045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4121831 |
End bp | 4123027 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637286384 |
Product | hypothetical protein |
Protein accession | YP_270596 |
Protein GI | 71282570 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTTTTT CATCATCATC TTTTTCAGCT GATGATGAAG CACTAATAAA AAAAGTTAAT CAATTAGAAA AAGAAATACA GGCGCTAAAA GATTCAGTTA ACTCTGCTGA TAGTGAAGTA GAGTTAACAG TAGATAAAAA AGAAGATACG GGTATTAAGT TAGGTGGGGC AGTCCGCTTT CAGTATTCTT ATGAAGACTA TAATGATGAT AATACTAGCC GAGGAGGCGA TTTAGATTTT GATGTTTTCC GTCTTGATTT AAATGGTGAA GTTGGCGGGG TAATTTTATC TGCTCAATAT CGCTGGTTTC AATACATGAA TGTAATTCAT CATGCTTGGG CCGGTTATGA TTTTGATGAA AAATGGCAAG GTCAAATAGG TATAACACGT GTGCCATTTG GTAACTTGAA CTACAACTCA CATAATTACT TTTTTAGTAG TAATTATTAT GTTGGTTTAG AAGATGATTA TGATGCGGGT ATAAAGTTTA TTAGAAAAAC TGATGAACAT GATTTAAGGA TCGCTTTTTT CTTTACTGAT GAAATGGGCG GCATCGATGG CTACGTAGAT GATAGATCAG ATCGATACTC TTACGATATT GTTGGTGTTC GTGCTAATGA TGAAGGTATT TATGACGAAC CTGACAATGC AGCTGCCGAG CATAATACAA TAAGTTTACG TTATGCCTAT CAGTTATCGA ATGTTGAACT GGGCTTCTCT TACTTAAGCG GTGATTTGCG TGACTCAAGC TCATCCATAG GTGAACGAAC TGCTTATGCG ATACACAGTG ATGCACAATT TGATCGTTGG AACGTAAAGC TACAATATAC CGACTATGAG TATGATTTTG ATGAATACTC GCCCTCCATT GCGGTTGGAG CTTACAGTTT TTATGATTCC ATTCCAAGTG AAGCCAAGCT TTATACTGTT AATGTTGCCT ACTTACAACC TGTTGAGTTT GGACCTATTA CCTCATTAAA TTTTTATAAT AATTATAATT TGATGACAGA TAAGTCGGGC GACTTTAATA ATGACACTAT TATGAACGTC TTGGGCGTCG CTATTTCAGC GGGTGGACTT TATACCTACG TTGATTTGGT TAGAGCAAAA AATCAGCCAT TTGTCGGTGG CACCATGGCA GGCGATAGTG ATGACTGGCA AACAAGATTT AATATTAATT TTGGTTATTA TTTTTAA
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Protein sequence | MCFSSSSFSA DDEALIKKVN QLEKEIQALK DSVNSADSEV ELTVDKKEDT GIKLGGAVRF QYSYEDYNDD NTSRGGDLDF DVFRLDLNGE VGGVILSAQY RWFQYMNVIH HAWAGYDFDE KWQGQIGITR VPFGNLNYNS HNYFFSSNYY VGLEDDYDAG IKFIRKTDEH DLRIAFFFTD EMGGIDGYVD DRSDRYSYDI VGVRANDEGI YDEPDNAAAE HNTISLRYAY QLSNVELGFS YLSGDLRDSS SSIGERTAYA IHSDAQFDRW NVKLQYTDYE YDFDEYSPSI AVGAYSFYDS IPSEAKLYTV NVAYLQPVEF GPITSLNFYN NYNLMTDKSG DFNNDTIMNV LGVAISAGGL YTYVDLVRAK NQPFVGGTMA GDSDDWQTRF NINFGYYF
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