| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3935 |
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| Symbol | |
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| ID | 3519590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4118826 |
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| End bp | 4120337 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637286381 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_270593 |
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| Protein GI | 71277951 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.558201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAGCGT TAACGTTGAA AGTATTTTAT GAAAACTCGG ATCCTAATAA ATCGTCATCG
AAGCAAGCAA AGTATTTGGC GATTGCTGAT GCCTTGAGAA AGGCGATTAG AGAAAGACAG
ATTGCGCCGA CAGAAGCATT ACCTTCTGCA CGAAAACTTG CTCAGCAGTT ATCGGTAAAT
CGTCATACTA TTATGGCGGC CTTGGCTGAG TTAGTAGCGC AAGGCTGGGT TGAAGTAAGA
GAGCGTTCAG GTTATCGAGT AGTAGAAAAC CTGCCAATTC AAGGCAGTCG TACAATAAAT
AAAGTGGCGA AAACACCGCA AAGTTTTGAC TGGAAATTTC GAGTCAAACA AACCTTTGCT
GTTACGCCGA AAGTTAAAGC GAGCGAATAT CCTTATAACT TCTCTGGTGG CCAGCCTGAT
ATCAGGAAAT TTCCTTTTGA TGAGTTTAAA AGTCATTTTT CACAAACGTG TCAGCGTCCT
AAAATAGATG ATTTAAGTTA CGGTGATAGT CGCGGAGAAG CTGAGCTTAT TGAGGAAATA
GCCACGTATT TACGACGCGT TCGCTCGATT ACTGATAAAG AGTTGATGAT TTGCAATGGC
TCACAAGAAG CCTTGTATAT GATTTCACAG TTACTTCTAC AACCCGGTGA TAAAGTTGCG
GTTGAGCAGT TAGGTTATCC ACCAGCTTGG GCTGCCTTTG AGCGCACAGG TGCGACATTA
ATTGCTGTTA AACAAGATGA GCGAGGCATA AATCCTGAGC ATTTAGCGCA AGTATTTGCA
AAAGGTAAGG TTAAGTTGCT TTATCTTACG CCATTACATC AATACCCAAC GACTGTCTCT
TTAGATATCT CTAGGCGTAT GCAAATTTAT CAATTAGCGG TGCAATACGG TGTCGCCATT
GTAGAAGATG ATTATGATCA CGAATTTCAT TATGACAGCC AGCCGATTGC ACCTATGGCT
GCTGATGATC CAGCAGGTTT GGTTATCTAT ATATCTACCT TTTCAAAACT GATGTTTGGT
GGCGCACGTA TTGGCTATGT TGTGGCAAAT AATGCCCTAA TTGAGCAAGT GGCGGCTTAT
AAAATGGTAA TGAACCATAA GTGTAATGTT TTAGTTCAAC AAGCGGTGGC TAAGTGGATG
CAGCAAGGTG GCTTTGAAGC ACATTTACGA CGTATGACAC GTTTATATCA AAAGCGTCGT
GATTTTATGG TTCAACAGCT AAGATCCTTT CAAGATAAAG GCTTACCAAT ACATTTCGAA
GTACCTGCTG GCGGTATGGC AATATGGCTT GATACCGGTA AGTCGATTAT TGGGCTAAAA
GAGAAGTTAC TTCCACAGCA AGTGTACTTA CAAACCGAAG TGGAATTTAG TAGATTTAAT
GAGTTGCCTG ATGACTTACC TAGGACAAAA TATCGGTTTA TCCGGCTGGG TTTTGCGGCA
ATGAATGAAG CAGAAGTTAC CCAAGGATTG GACATTGTGA TGAATACTTT ATATGGCTTG
GTCAGCGAAT AA
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| Protein sequence | MKALTLKVFY ENSDPNKSSS KQAKYLAIAD ALRKAIRERQ IAPTEALPSA RKLAQQLSVN
RHTIMAALAE LVAQGWVEVR ERSGYRVVEN LPIQGSRTIN KVAKTPQSFD WKFRVKQTFA
VTPKVKASEY PYNFSGGQPD IRKFPFDEFK SHFSQTCQRP KIDDLSYGDS RGEAELIEEI
ATYLRRVRSI TDKELMICNG SQEALYMISQ LLLQPGDKVA VEQLGYPPAW AAFERTGATL
IAVKQDERGI NPEHLAQVFA KGKVKLLYLT PLHQYPTTVS LDISRRMQIY QLAVQYGVAI
VEDDYDHEFH YDSQPIAPMA ADDPAGLVIY ISTFSKLMFG GARIGYVVAN NALIEQVAAY
KMVMNHKCNV LVQQAVAKWM QQGGFEAHLR RMTRLYQKRR DFMVQQLRSF QDKGLPIHFE
VPAGGMAIWL DTGKSIIGLK EKLLPQQVYL QTEVEFSRFN ELPDDLPRTK YRFIRLGFAA
MNEAEVTQGL DIVMNTLYGL VSE
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