| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3922 |
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| Symbol | |
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| ID | 3523366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4095241 |
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| End bp | 4096335 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637286368 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_270580 |
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| Protein GI | 71278036 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCTG TGCATCCTAA ACTTATCGAA AGTTTAGTAG AACAAACACC AAGAGCAATG
ATTGCTATGC TAATAGTGTC TTCTGCTTAC TTTTGGATAT TCATTAAATT TATTCCATTT
GAAATTTTAG TTGTCTGGTT TGTTTTTCAA ATGTTTTTGG CTATGTATCG TTTCTATAAT
GCAATAATGT TTAAAAAACA TTTAGCACAG AAGGCTCATG AAAAAATAGA AAAAAATGAA
CTATATTTCA TGCTTTCTAA TGTGTTTCAA GCAGCTATGT GGACAATATC TTCAGTTCTA
TCCATTGTAT ATGCACCTCA ACCCTATGAG TTGGTTAGCT TGATTATGAT CATCGGCATT
ATAACGGCTG CCGCACTCTC TATGTCATCG CTGTATAAGG CATATTTGCT CTTTTTCTTT
TCAATGATAA TTCCTCAAAT TATTATTATG ATTTCCTTTG GAGAACACCA ACATATTGGT
TTAGTTGTCT TAATTTTTAT TTATATACCC GCTACTATTT TACTTTCAAG AGCCATATAC
AATAGCCGTT TATCGAGTGT TGAAGCGAAT GACAGCCTTG AAAAAAGTGT CAATGAATTA
CATCGATTAT CGATAATGGA TAACTTAACT AATATATACA ATCGACGTTA TTTTTTTGAG
ATGTCCAAGA AATTAATTGC TACAGCATTT AGAGAACAAA AACCAGTTTC ACTAATAATG
CTTGATATCG ATTTATTTAA AAGAGTCAAT GATAATTATG GGCACCAAGC TGGAGATTGT
ATTTTAATAG ATTTAGTAAA AGAGCTAGAA AAAGTTATGC GTAAAAGTGA TGTTTTTGCT
CGTATCGGCG GTGAAGAATT CACAATTTTA CTCAATAATA CCTCACTTGA GGGGGCAAAG
GTCATTGCTG AGAAAATGCG TTTAACGATA GAAAATAAAG TCTTTATTTA TAATACGACT
TCGATAGACA TAACGATTAG TATTGGTGTG TCTGAACTGA ATACAGAAAA TACTTCTATT
GAAGATTTAT ATAAGCAAGC AGACAAACAG CTCTATAGAG CTAAACATAA AGGAAGAAAT
AGGGTCTGTA CGTAA
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| Protein sequence | MAAVHPKLIE SLVEQTPRAM IAMLIVSSAY FWIFIKFIPF EILVVWFVFQ MFLAMYRFYN
AIMFKKHLAQ KAHEKIEKNE LYFMLSNVFQ AAMWTISSVL SIVYAPQPYE LVSLIMIIGI
ITAAALSMSS LYKAYLLFFF SMIIPQIIIM ISFGEHQHIG LVVLIFIYIP ATILLSRAIY
NSRLSSVEAN DSLEKSVNEL HRLSIMDNLT NIYNRRYFFE MSKKLIATAF REQKPVSLIM
LDIDLFKRVN DNYGHQAGDC ILIDLVKELE KVMRKSDVFA RIGGEEFTIL LNNTSLEGAK
VIAEKMRLTI ENKVFIYNTT SIDITISIGV SELNTENTSI EDLYKQADKQ LYRAKHKGRN
RVCT
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