| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3913 |
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| Symbol | clpB |
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| ID | 3521723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4086397 |
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| End bp | 4088982 |
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| Gene Length | 2586 bp |
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| Protein Length | 861 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286359 |
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| Product | ATP-dependent chaperone protein ClpB |
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| Protein accession | YP_270571 |
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| Protein GI | 71281252 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTAG ATCGTTTTAC CCAATCATTT CAAGAATCCA TTGCCGATGC GCAATCACTT
GCCCTTGGCA AAGACCATCA GTTCATTGAA CCCGTTCATT TAATGATGGC GTTATTGAAT
CAAAACGGCA ATTCTATCAT TGCGTTATTG AAGAGTGCAG GTATTGATGT GCGCTCTTTA
CGTCAGAAAC TAGATGAAGC GTTAAGCTCA TTAGCACAAG TGCAAGACAG CGCTGGCGAT
GTACAACTAT CAGCAGCTTC AGGGCGAATT TTAAATCTTT GCGATAAGCA TGCGCAAAAA
ATGTCAGATA AATTCATTTC CTCAGAGATG TTTTTACTCG CGGTTATCGA TGATAAAGGT
CCTTTAGGTC AAATCCTGGC CGAATTAGGC GCAAACCAGC AACGGATAAA GTCGGCAATC
GATCATGTAC GAGGTGGTGA AAATGTTGAC GATCAAAATG CAGAAGATGT TCGCCAGGCC
CTAAATAAAT ATACGGTTGA TTTAACAGAA CTTGCTGAGC ATGGAAAACT TGATCCTGTT
ATCGGTCGAG ATGATGAGAT CCGCCGCACT TTGCAAGTAT TACAACGACG TACTAAAAAC
AATCCAGTAC TCATAGGGCA ACCCGGTGTT GGTAAAACTG CCATTGTTGA AGGTTTAGCT
CAGCGCATTG TGAATAATGA AGTGCCTGAA GGCTTGAAAA ATAAGCGAGT TTTGTCACTA
GATATGGGAT CTCTTGTTGC AGGAGCAAAA TATCGAGGTG AATTTGAAGA GCGTTTAAAA
GCTGTTTTAA ATGAATTGTC AAAAGAAGAA GGGCAAGTCA TTCTCTTTAT TGATGAATTG
CACACTATGG TCGGTGCTGG AAAGTCAGAT GGTGCTATGG ATGCCGGTAA TATGTTAAAA
CCAGCATTAG CACGTGGTGA TTTACATTGT GTGGGGGCCA CTACGCTTGA TGAATATCGA
AAGTATATTG AAAAAGATGC TGCACTTGAA CGACGTTTTC AAAAAGTACT GGTAGAAGAG
CCAAGTGTGG AAGATACCAT TGCAATTTTA CGTGGTTTAA AAGAACGTTA TGAACTGCAT
CATTCGGTAA ATATTACCGA TCCAGCTATT GTCGCTGCCG CAACATTATC CCATCGCTAT
ATCAGTGATC GACAATTACC GGATAAAGCG ATTGATCTTA TTGACGAGGC CGCCTCAAGT
ATTCGTTTAC AGATGGACTC CAAACCAGAA GATTTAGATA GACTCGAACG ACGGTTAATA
CAGTTAAAGC TTGAGCAAAG AGCATTAGAA AAGGATGAAG ATGAGGCTAC CATCAAGCGT
TTGGCAATCA TTTCTCAACA AATTTCTGAA AAGCAGAAAA AGTATGATGA GTTAGATGAA
GTTTGGACCA CTGAAAAAGC AGCGCTTTAT GGCGCTCATA CGATAAAAGA AGAACTTGAA
CAAGCACGAA TAGAACTTGA AGCGGCAAGA CGAACTGGCG ATTTAAATCG CATGTCTGAG
CTGCAGTATG GAAAATTACC AGAGCTAGAA AAGCAATTAG ATTTAGCAAG CCAAGCTGAA
ATGCAAGAAA TGACTTTATT AGCCAATAAA GTTACTGAAG TTGAAATCGC CGATGTTCTT
AGTCGCGCAA CCGGTATTCC TGTTGCTAAA ATGTTGGAGC AAGAGCGTGA TAAATTATTA
CATATGGAAG ATAACCTACA CCAAAATGTA ATTGGTCAAC ATGAAGCAGT AACCTCAGTG
TCTAATGCGA TTAGACGATC CCGTGCTGGT TTAAGCGATC CTAATCAGCC AATTGGTTCA
TTTTTATTCT TAGGCCCAAC GGGTGTTGGT AAAACGGAGT TAACTAAAGC GCTTGCAGAG
TTTTTATTTG ACTCACAAGA TGCTTTAATT CGTGTTGATA TGTCAGAGTT TATGGAAAAA
CACTCGGTCG CACGTCTAGT GGGAGCTCCT CCTGGTTATG TTGGTTATGA AGAGGGTGGT
TATCTAACCG AAGCAGTACG CAGAAAACCT TACTCAGTCA TCTTACTTGA TGAGATAGAA
AAAGCTCACC CGGATGTCTT TAATATTTTA TTACAAGTCT TAGATGATGG CAGATTAACT
GATGGGCAAG GCAGAACAGT AGATTTTAAA AACACTGTTA TCATCATGAC CTCAAATATT
GGCTCTGACA TTATTCAAGA GTTAGCTGGT GAAAGTCAGT ATCACCAGAT GAAAGAAGAA
GTAATGAATA CATTAGGTCA GCATTTTAAA CCTGAGTTTA TTAATCGTGT CGATGAGTCA
GTAGTATTCC ATCCATTGGT TGCTGAACAA ATCAAGAAAA TTGCAAAAAT ACAAATTGAA
GCGTTAGCAG ACCGATTAAT CGAGCAAGAG CTAAATTTAA CTATAAATGA AGAAGCACTT
TCACTCATTT CTGCGGCGGG ATTCGACCCA ATATTCGGTG CGAGACCACT GAAACGAGCA
ATACAGCAAG GTGTTGAAAA CCCATTAGCC CAAAAAATAC TCGGTAATGA ATTTACTAAA
GGCTGTATTA TTGAAGTGAG TGTTGTAGAA GGACAATTAG CTTTTTCTGC TAAATCACCT
CATTGA
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| Protein sequence | MRLDRFTQSF QESIADAQSL ALGKDHQFIE PVHLMMALLN QNGNSIIALL KSAGIDVRSL
RQKLDEALSS LAQVQDSAGD VQLSAASGRI LNLCDKHAQK MSDKFISSEM FLLAVIDDKG
PLGQILAELG ANQQRIKSAI DHVRGGENVD DQNAEDVRQA LNKYTVDLTE LAEHGKLDPV
IGRDDEIRRT LQVLQRRTKN NPVLIGQPGV GKTAIVEGLA QRIVNNEVPE GLKNKRVLSL
DMGSLVAGAK YRGEFEERLK AVLNELSKEE GQVILFIDEL HTMVGAGKSD GAMDAGNMLK
PALARGDLHC VGATTLDEYR KYIEKDAALE RRFQKVLVEE PSVEDTIAIL RGLKERYELH
HSVNITDPAI VAAATLSHRY ISDRQLPDKA IDLIDEAASS IRLQMDSKPE DLDRLERRLI
QLKLEQRALE KDEDEATIKR LAIISQQISE KQKKYDELDE VWTTEKAALY GAHTIKEELE
QARIELEAAR RTGDLNRMSE LQYGKLPELE KQLDLASQAE MQEMTLLANK VTEVEIADVL
SRATGIPVAK MLEQERDKLL HMEDNLHQNV IGQHEAVTSV SNAIRRSRAG LSDPNQPIGS
FLFLGPTGVG KTELTKALAE FLFDSQDALI RVDMSEFMEK HSVARLVGAP PGYVGYEEGG
YLTEAVRRKP YSVILLDEIE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFK NTVIIMTSNI
GSDIIQELAG ESQYHQMKEE VMNTLGQHFK PEFINRVDES VVFHPLVAEQ IKKIAKIQIE
ALADRLIEQE LNLTINEEAL SLISAAGFDP IFGARPLKRA IQQGVENPLA QKILGNEFTK
GCIIEVSVVE GQLAFSAKSP H
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