Gene CPS_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3873 
Symbolepd 
ID3519039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp4045898 
End bp4046917 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content40% 
IMG OID637286319 
ProductD-erythrose 4-phosphate dehydrogenase 
Protein accessionYP_270535 
Protein GI71278354 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTA GAATTGCCAT TAATGGCTTT GGCCGTATCG GTCGCAGCGT AGTTAGAGCG 
CTATATGAAA GTGGCAAGAC AGATTTATTC ACCTTAGTTT CAATCAATGA ACTAGCACCT 
GCTTCAGGCA TAGCACATCT ATTAAAGTAT GATAGTACGC ATGGTCGATT TCCTTTCAGT 
GTTAGTGAGA AAGAAAACCA ATTAATTATC AATGGTGATG AAATAGCATT AACGCATATT 
GGTAACTTAA ATAGCCTACC TTGGCAGCAA CAAAATATTG ATATTGTCCT TGATTGTACC 
GGTAAGTACG GCAATAAAGC TGATGGTTTA AGCCATATTA ATCGAGGCGC TAAGAAAGTT 
TTATTCTCTC ACCCGGGCAG CCAAGATATT GATGCAACCA TCATTTACGG CATAAATCAT 
CAAACATTAA CGTCAAGTGA TAGGGTAGTA TCAAATGGCT CCTGTACAAC AAATTGTATA 
GTGCCCGTGA TTAAAGTCAT CGATGAAGCA TTCGGCGTTG AGAGTGGTAG CATCACCACC 
ATACATTCAT CAATGCATGA TCAACAAGTC ATTGATGCTT ATCATAAAGA TCTACGCCTC 
TCTCGTGCAG CAAGCCAATC AATCATTCCA GTCGATACTA AACTAGCTGC GGGTATTGAA 
CGAATATTAC CAAAATTTAA AGGCCGCTTT GAAGCGATTG CCGTTCGCGT ACCTACAATC 
AATGTTACCG CAATGGATTT AAGCCTTACC GTTAATAATG ATGTTTGCAT TTGTGACATC 
AATCAAGCGA TACAAGCCGC GACCAGTAAC CATGATTTGT ATGGCGTATT ATCGTATACC 
GAAGAGCCAC TGGTTTCGGT CGATTTTAAT CATGACCCTC ATTCTTGTAT CGTCGATGGT 
AATCAAACAC GAGTCAGCCA TAAGCGTTTA ATTAAAATGC TGGTTTGGTG TGACAATGAA 
TGGGGCTTTG CCAATCGCAT GTTAGATACT GCTATGGCAA TGCATCAAGC AGAAAACTAA
 
Protein sequence
MTIRIAINGF GRIGRSVVRA LYESGKTDLF TLVSINELAP ASGIAHLLKY DSTHGRFPFS 
VSEKENQLII NGDEIALTHI GNLNSLPWQQ QNIDIVLDCT GKYGNKADGL SHINRGAKKV 
LFSHPGSQDI DATIIYGINH QTLTSSDRVV SNGSCTTNCI VPVIKVIDEA FGVESGSITT 
IHSSMHDQQV IDAYHKDLRL SRAASQSIIP VDTKLAAGIE RILPKFKGRF EAIAVRVPTI 
NVTAMDLSLT VNNDVCICDI NQAIQAATSN HDLYGVLSYT EEPLVSVDFN HDPHSCIVDG 
NQTRVSHKRL IKMLVWCDNE WGFANRMLDT AMAMHQAEN