| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3801 |
|---|
| Symbol | folC |
|---|
| ID | 3521742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3962813 |
|---|
| End bp | 3964126 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637286248 |
|---|
| Product | folC bifunctional protein |
|---|
| Protein accession | YP_270464 |
|---|
| Protein GI | 71281271 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0285] Folylpolyglutamate synthase |
|---|
| TIGRFAM ID | [TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.129032 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAT ACAATTCAAG CCACTATCAA GATTTAACTA ATCTCGATCA GTGGCTTTAT
TATTTAGAAA ACTTACATAG TACTGAGATA GATCTTGGTT TATCTCGTGT TGGCAAAGTT
GCAGAACGCT TAGCTATAAA CTTGAATTTT GCTAAGGTTA TTACTGTTGC GGGCACTAAT
GGTAAAGGTA CCACCTGTGC TTTTATTGAA AACGCCTTAC TCAATAGTAA AGAACTTGCT
TCACCGCGAG GTGTTGCCGT TTACTCATCT CCTCATATTG AGCGCTTTAA TGAACGTCTG
CGGATAAATA AGCAAGATGT AGAAGATCAG GCCCTAATCA ATGCTTTTAA ACGTATTGAA
GTTGCTCGAG AAGATATTTC GCTTAGTTAC TATGAGTATA CAACCTTAGC TGCATTACTC
GTGTTAATGG AAGCTATGCC AAGCTTTATT ATTCTTGAGG TTGGCCTGGG TGGTCGGTTA
GATGCAACTA ATATTATCGA TGCTGATATA GCTGTCATCA CAACAATAGA TCTCGATCAT
CAAAGCTTTC TAGGCAATGA TAGAGAAAGT ATTGGTTTTG AAAAAGCAGG AATCATGCGA
CAAGAGCAAG ACATTGTTAT TGGTGATACT AATGCTCCCA AGTCAGTGAT AAATCATGCT
AACGAGTTAC ATAAAAACCA AGTTAATAGG ATATTTTTAC GAGACCAAGA TTTTATCGTT
CAAAATACTC AACCTCATTG GAACTGGAAA ACTAAACAAA CGCAGTTAAC AGAACTAAAA
GCTCCCCATA TTCCACGCGA CAATGTCGCA ACAGCACTCA TGGTATTAGA AAAGCTTAAT
TTGACGCTGA CACCTGATTT TGTCAATGAA GTTATTGCTA AGACTAAGGT TGCAGGGCGG
ACTGAGTTAA TCAAGCAGAA GGGCCTATGT GATGTTATTC TTGATGTCGG TCATAATCCA
CAAGCTACTC GTTATCTCGC TGGATATCTT AAGCAGATAA AAGAGCAAGC TAACTATCAA
AATATTTATG CTGTGGTTGC TATGCTGGGC GATAAAGATA TTAGTGCAAG TTTAGAATCA
CTAAAAGATG ATATCGATTT TTGGTATACC GGTGCGTTAA GTGTGCCAAG AGCTGCTACA
AAAGAAACAA TGGCAAGTAA GTTAGCGTTA TTTACAAATT CAGTTAATTG TTTTGACAAT
GTGGATGAGG CCTTTAGAAT GGCGAATAAG CAGGCTAATT CGTCTGACTT AATTCTAGTC
TTTGGTTCAT TTTTTACTGT TTCGAAAATC AGAGCACAGT TAACTATTAG TTAG
|
|---|
| Protein sequence | MSKYNSSHYQ DLTNLDQWLY YLENLHSTEI DLGLSRVGKV AERLAINLNF AKVITVAGTN
GKGTTCAFIE NALLNSKELA SPRGVAVYSS PHIERFNERL RINKQDVEDQ ALINAFKRIE
VAREDISLSY YEYTTLAALL VLMEAMPSFI ILEVGLGGRL DATNIIDADI AVITTIDLDH
QSFLGNDRES IGFEKAGIMR QEQDIVIGDT NAPKSVINHA NELHKNQVNR IFLRDQDFIV
QNTQPHWNWK TKQTQLTELK APHIPRDNVA TALMVLEKLN LTLTPDFVNE VIAKTKVAGR
TELIKQKGLC DVILDVGHNP QATRYLAGYL KQIKEQANYQ NIYAVVAMLG DKDISASLES
LKDDIDFWYT GALSVPRAAT KETMASKLAL FTNSVNCFDN VDEAFRMANK QANSSDLILV
FGSFFTVSKI RAQLTIS
|
|---|
| |