Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3786 |
Symbol | tig |
ID | 3518404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3951354 |
End bp | 3952661 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637286233 |
Product | trigger factor |
Protein accession | YP_270453 |
Protein GI | 71277800 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.363592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTTT CAGTTGAGAC TACACAAGGT TTGGAACGTC GTCTGACTAT TTCTGTTCCG GCCGAAAAAG TAGATGTAGA AGTAAAGAAT CGTCTTCGTC AAATCAGTAA AACACAGCGT ATTAACGGTT TCCGTCCAGG TAAAGTACCA CCGTCAGTAG TTCAAAAACG CTTCGGCAAA TCAGTACGTC AAGAAGTTGC TGGTGAAATC ATGCAGCGTA ATTTCGTTGA TGCTATTGTT GCAGAAAAAA TCAATCCAGC TGGTCGTCCT TCATTTGTTG CTAAAAGCAA TGAAGATGGT AAAGCATTAG AGTTTGAAGC AACTTTTGAA ATTTACCCTG TAGTTGAATT AAAAGATTTA GAAAAGATCG CTATCGAACG TCCAGAAGTT GACGTGACTG ATGCCGATTT AGATGAAATG TTTGTTACGC TACAAAAGCA ACATCAAACA TGGAAAGAAA ACAAACGTAA AACTAAATCA GGCGATAAAT TAACACTTGA TTTCACTGGT CGTGTAGACG GTGAAGAGTT TGAAGGTGGT AAAGCCGAAG GTTTTGAATT AGAACTAGGC GCTGGTCGTA TGATCCCTGG TTTTGAGAAA GAAGTTACTG GCATGAAAGC TGGTGATGAG GCAACTATCA AAGTTACTTT CCCTGAAGAT TATCATGCTG AAAATCTTAA AGGTAAAGAT GCTGAGTTTG ATATTGTTAT TCATAAAACT GAAGGTCCAA TTTTACCTGA AATTGATGAA GAGTTTGCAA AACTTTTTGG CATTGAAGAA GGTGGTGTTG AAGCTTTACG TGTTGAAGTA AGTAAAAATA TGGCACGTGA ATTAACTCAA GCCGTTAAAG CTAAAGTTAA AACACAAGTT ATTGATGGCT TATTAGCTGG ACATGAAGTT GATTTACCTT CGGCACTTGT TACGCAAGAA GTTGATGTTT TACGTCAACA AGCTATGCAA CGTTTCCAAG GCCAAATGGA TCCTAAGAAC TTACCACAAT TACCTGCTGA AATGTTTACA GAGCAAGCAG AACGTCGTGT TAAAATCGGT TTGCTTTTAG GTGAAGTAAT TAAAGTAAAT GAACTTAAAG TTGATGAAAC TAAAGTGAAT GAACTAATTG CTTCTGCGGC TTCAGCTTAT GAAGATCCTA AAGAAGTTAT TGAATACTAT GCTAACAACA ACGAGCTTAT GCAGCAGATG CAAAATGTTG CTTTAGAAGA GCAAGCTGTT GAGCTTTTAG TTGAAAAAGC TAAAGTTTCT GATAAAAAAG CTAGTTTCAA TGAAATAATG AACCCAGAAG CTAAGTAA
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Protein sequence | MQVSVETTQG LERRLTISVP AEKVDVEVKN RLRQISKTQR INGFRPGKVP PSVVQKRFGK SVRQEVAGEI MQRNFVDAIV AEKINPAGRP SFVAKSNEDG KALEFEATFE IYPVVELKDL EKIAIERPEV DVTDADLDEM FVTLQKQHQT WKENKRKTKS GDKLTLDFTG RVDGEEFEGG KAEGFELELG AGRMIPGFEK EVTGMKAGDE ATIKVTFPED YHAENLKGKD AEFDIVIHKT EGPILPEIDE EFAKLFGIEE GGVEALRVEV SKNMARELTQ AVKAKVKTQV IDGLLAGHEV DLPSALVTQE VDVLRQQAMQ RFQGQMDPKN LPQLPAEMFT EQAERRVKIG LLLGEVIKVN ELKVDETKVN ELIASAASAY EDPKEVIEYY ANNNELMQQM QNVALEEQAV ELLVEKAKVS DKKASFNEIM NPEAK
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