Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3785 |
Symbol | clpP |
ID | 3522356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3950580 |
End bp | 3951242 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637286232 |
Product | ATP-dependent Clp protease, proteolytic subunit ClpP |
Protein accession | YP_270452 |
Protein GI | 71281884 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0806419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTTAATT CTCAAATTAC ATCACAAAGA TCATCTCAAG TTTCATCACA AAGCAGTGCG ACAGGTATTG AAAGCGCGTT AGTGCCTATG GTTGTTGAAC AAACAGCTAA AGGTGAACGT TCGTATGATA TATACTCAAG GCTGTTAAAA GAGCGTGTAA TCTTCCTTTG TGGTCAAGTT GAAGATCATA TGGCTAATCT TATCATAGCG CAGTTATTAT TCTTAGAATC TGAAAGCCCT GATAAAGACA TATATTTATA CATAAACTCA CCAGGCGGTT CAGTAACTGC GGGTATGGCA ATATACGATA CCATGAAGTT TATCAAACCT AACATTAGCA CTGTGTGTAT TGGCCAAGCG GCAAGTATGG GCGCATTCCT ATTGTCAGGT GGTGAAAAAG GCAAACGTTA TTGTTTACCA AATGCTCGAG TCATGATTCA TCAACCTTTA GGCGGTTTTC AAGGGCAAGC GTCAGATTTT GAAATTCATG CGAAAGAAAT ATTATTCATA AAAGACAAAC TTAATAAATT AATGGCTGAA CACACAGGTC AAACATTGGA TAAAGTTTCT CAAGATACAG ACAGAGATAA TTTTTTAAGT GCAGAAGCAG CAGTTGAATA TGGATTAGTT GACTCCATAT TAGAACAACG TAACGATAAA TAG
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Protein sequence | MFNSQITSQR SSQVSSQSSA TGIESALVPM VVEQTAKGER SYDIYSRLLK ERVIFLCGQV EDHMANLIIA QLLFLESESP DKDIYLYINS PGGSVTAGMA IYDTMKFIKP NISTVCIGQA ASMGAFLLSG GEKGKRYCLP NARVMIHQPL GGFQGQASDF EIHAKEILFI KDKLNKLMAE HTGQTLDKVS QDTDRDNFLS AEAAVEYGLV DSILEQRNDK
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