Gene CPS_3784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3784 
SymbolclpX 
ID3521714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3949230 
End bp3950504 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content38% 
IMG OID637286231 
ProductATP-dependent protease ATP-binding subunit ClpX 
Protein accessionYP_270451 
Protein GI71281243 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1219] ATP-dependent protease Clp, ATPase subunit 
TIGRFAM ID[TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00164592 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATA TTAAAAGTGG TGGCGATAAT GGTAAATTAC TTTACTGCTC ATTTTGTGGC 
AAAAGCCAAC ATGAAGTACG TAAATTAATT GCTGGCCCAT CAGTCTTTGT TTGTGATGAA
TGTGTAGAGT TATGTAATGA CATTATTCGC GAAGAAATTT CTGAAATTTC GCCAAAAGAA
AGTAAAGAAG CATTGCCTTC TCCTATCGAG ATCCGTGAGA GCCTCGATGA ATACGTTATT
GGTCAAGACC ATGCGAAAAA AGTTTTAGCA GTTGCTGTTT ATAATCATTA TAAGCGATTA
CGTAATGGTG ATAATCATAA TGGTATTGAA CTTGGTAAAA GTAATATCTT GCTTATTGGG
CCTACAGGTA GTGGTAAAAC ATTATTAGCG CAGACCCTTG CACGATTATT AGATGTTCCA
TTTACAATGG CAGATGCAAC CACGTTAACT GAAGCTGGCT ATGTTGGTGA AGACGTAGAG
AACATCATTC AAAAATTATT ACAGAAATGT GATTACGATG TTGAGAAAGC TCAACGTGGT
ATCGTTTACA TTGATGAAAT CGATAAGATC TCACGTAAGT CAGACAATCC ATCTATAACC
CGTGATGTTT CAGGTGAAGG TGTTCAACAA GCTTTGTTAA AGCTTATTGA AGGTACCGTC
GCTTCTGTGC CGCCTCAAGG TGGACGCAAG CATCCGCAGC AAGAGTTTTT ACAAGTAGAT
ACGTCCAAAA TACTCTTTAT TTGTGGTGGA GCGTTTGCAG GTTTAGACAA AGTTGTTGAG
CAGAGAAATC ATACTGGTAC TGGTATCGGT TTTGGCGCTG AAGTTCGTGG TAAAGATCAA
GAGATATCAT TGACGGATCG TTTAGCTGAT GTTGAGCCAC AAGATTTAGT TAAATATGGT
TTGATTCCAG AATTTATTGG ACGCTTACCT GTTTTAGCAA CATTACGTGA ACTAGATGAA
GCTGCCCTTA TTCAAATATT ACAAGAGCCT AAAAATGCGC TAACTAAGCA ATTTACGGCA
TTATTTGATA TGGAAAATGT CGAATTGGAA TTCAGAAGTG ATGCGTTACA TGCTATAGCC
CGTAAAGCGA TGGACCGAAA AACAGGTGCT CGTGGTTTAC GCTCTATTGT TGAAGCTGTA
TTGCTTGACA CCATGTATGA ATTACCATCG ATGGAAAATG TTAGCAAAAT CGTTGTTGAT
GAAAATACAA TCAAAGGTGA GAGCAAGCCG ATTGTTATTT ATGATAGTAA ACAAGAACAA
GCTGCTTCCG AGTAA
 
Protein sequence
MTDIKSGGDN GKLLYCSFCG KSQHEVRKLI AGPSVFVCDE CVELCNDIIR EEISEISPKE 
SKEALPSPIE IRESLDEYVI GQDHAKKVLA VAVYNHYKRL RNGDNHNGIE LGKSNILLIG
PTGSGKTLLA QTLARLLDVP FTMADATTLT EAGYVGEDVE NIIQKLLQKC DYDVEKAQRG
IVYIDEIDKI SRKSDNPSIT RDVSGEGVQQ ALLKLIEGTV ASVPPQGGRK HPQQEFLQVD
TSKILFICGG AFAGLDKVVE QRNHTGTGIG FGAEVRGKDQ EISLTDRLAD VEPQDLVKYG
LIPEFIGRLP VLATLRELDE AALIQILQEP KNALTKQFTA LFDMENVELE FRSDALHAIA
RKAMDRKTGA RGLRSIVEAV LLDTMYELPS MENVSKIVVD ENTIKGESKP IVIYDSKQEQ
AASE