Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3784 |
Symbol | clpX |
ID | 3521714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3949230 |
End bp | 3950504 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637286231 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_270451 |
Protein GI | 71281243 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00164592 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATA TTAAAAGTGG TGGCGATAAT GGTAAATTAC TTTACTGCTC ATTTTGTGGC AAAAGCCAAC ATGAAGTACG TAAATTAATT GCTGGCCCAT CAGTCTTTGT TTGTGATGAA TGTGTAGAGT TATGTAATGA CATTATTCGC GAAGAAATTT CTGAAATTTC GCCAAAAGAA AGTAAAGAAG CATTGCCTTC TCCTATCGAG ATCCGTGAGA GCCTCGATGA ATACGTTATT GGTCAAGACC ATGCGAAAAA AGTTTTAGCA GTTGCTGTTT ATAATCATTA TAAGCGATTA CGTAATGGTG ATAATCATAA TGGTATTGAA CTTGGTAAAA GTAATATCTT GCTTATTGGG CCTACAGGTA GTGGTAAAAC ATTATTAGCG CAGACCCTTG CACGATTATT AGATGTTCCA TTTACAATGG CAGATGCAAC CACGTTAACT GAAGCTGGCT ATGTTGGTGA AGACGTAGAG AACATCATTC AAAAATTATT ACAGAAATGT GATTACGATG TTGAGAAAGC TCAACGTGGT ATCGTTTACA TTGATGAAAT CGATAAGATC TCACGTAAGT CAGACAATCC ATCTATAACC CGTGATGTTT CAGGTGAAGG TGTTCAACAA GCTTTGTTAA AGCTTATTGA AGGTACCGTC GCTTCTGTGC CGCCTCAAGG TGGACGCAAG CATCCGCAGC AAGAGTTTTT ACAAGTAGAT ACGTCCAAAA TACTCTTTAT TTGTGGTGGA GCGTTTGCAG GTTTAGACAA AGTTGTTGAG CAGAGAAATC ATACTGGTAC TGGTATCGGT TTTGGCGCTG AAGTTCGTGG TAAAGATCAA GAGATATCAT TGACGGATCG TTTAGCTGAT GTTGAGCCAC AAGATTTAGT TAAATATGGT TTGATTCCAG AATTTATTGG ACGCTTACCT GTTTTAGCAA CATTACGTGA ACTAGATGAA GCTGCCCTTA TTCAAATATT ACAAGAGCCT AAAAATGCGC TAACTAAGCA ATTTACGGCA TTATTTGATA TGGAAAATGT CGAATTGGAA TTCAGAAGTG ATGCGTTACA TGCTATAGCC CGTAAAGCGA TGGACCGAAA AACAGGTGCT CGTGGTTTAC GCTCTATTGT TGAAGCTGTA TTGCTTGACA CCATGTATGA ATTACCATCG ATGGAAAATG TTAGCAAAAT CGTTGTTGAT GAAAATACAA TCAAAGGTGA GAGCAAGCCG ATTGTTATTT ATGATAGTAA ACAAGAACAA GCTGCTTCCG AGTAA
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Protein sequence | MTDIKSGGDN GKLLYCSFCG KSQHEVRKLI AGPSVFVCDE CVELCNDIIR EEISEISPKE SKEALPSPIE IRESLDEYVI GQDHAKKVLA VAVYNHYKRL RNGDNHNGIE LGKSNILLIG PTGSGKTLLA QTLARLLDVP FTMADATTLT EAGYVGEDVE NIIQKLLQKC DYDVEKAQRG IVYIDEIDKI SRKSDNPSIT RDVSGEGVQQ ALLKLIEGTV ASVPPQGGRK HPQQEFLQVD TSKILFICGG AFAGLDKVVE QRNHTGTGIG FGAEVRGKDQ EISLTDRLAD VEPQDLVKYG LIPEFIGRLP VLATLRELDE AALIQILQEP KNALTKQFTA LFDMENVELE FRSDALHAIA RKAMDRKTGA RGLRSIVEAV LLDTMYELPS MENVSKIVVD ENTIKGESKP IVIYDSKQEQ AASE
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