| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3764 |
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| Symbol | tyrR |
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| ID | 3522876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3929016 |
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| End bp | 3930566 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286211 |
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| Product | sigma-54 dependent transcriptional regulator TyrR |
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| Protein accession | YP_270431 |
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| Protein GI | 71282402 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.286891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTGG AAATTACTTG TCATGACCGT GTTGGCATGG GACAAAAAGT ATTAGGTATA
TTTGTCGAAC ACGGCATTAA TGTACGTGGC ATTGAGTTAA TGCAGCCTGG GCGTATTTTT
ATTAATATTC CCAGTTTAGA CTTCTCTGAT TTGCAAACAT TTATGCCGCA ATTACGCTTG
CTTGAAGGAG TAGGTGATGT AAAAACTGCC CCTTACATGC CATCTGAGCG TGAAAGAAAT
GAACTTGCTA CCTTAATTAA AACCTTTCCA GACCCCTTTA TCTCAATTGA CAGAAAGGGC
AATATCCGAA TTGTTAACAC CATCGCCTCG AGTATTATTG GTGAGAGCGA AACGTCTCTA
GTTGGTCAAC ACATTAGCTT GTGGTTGAAA GGTTTCAACT TTAATCGTTG GTTAGATGCC
AATGATGTAC TTGCTCAAAC TCGACGGTTG AAATTCCAAG GCGATGACTT TGTCGCTGAT
ATTATGCCAA TTCACGTTGC TGATGAAGAA CACAAGCAAG TACTTGCTGG CGCTGTGCTA
ATTTTAAAGT CTGAAGCACG ACTTGGCCAG CAAATGAATG TTTTTAAACA GCCTAATGAG
AATACTTTTT CAGGTATTCA AGCAAGTTCA AGCGCAATGC GAAAAGTCAT TCGTGAAGCT
AAACGTATGT CGTCACTCGA CTCTTCAATT TTAATTATGG GTGAAACGGG TACCGGTAAA
GAGTTATTAG CAAGAGCGTG TCATGGTGCT AGTGAACGCG CAGAAAATCC TTTTATGACG
TTAAATTGTG CCGCATTGCC TGATGATGTT GCAGAGTCTG AATTATTTGG TGTCGGTGAA
AAAGAGCAAG AGTCAAGTAA GCGTGGAATC TTTGAACTTG CCGATGGCGG TACTGTATTC
CTTGATGAAA TTGGCGAAAT GTCAGCCAAA TTACAAAGTA AATTATTGCG AGTAATTCAA
CACGGCAGTT TTAGACGTGT GGATTCTGAG CAAGAAGTTA CGGTGAATGT ACGTATCATT
AGCTCTACCA ACAAAGATCT ACTTAATCTT GTTTCAATAG GGGATTTTAG AGAAGATCTC
TATTATAGAT TAAACGTATT TGGCCTCACA TTACCCGCTC TTAGAGAGCG TCGTAGCGAC
ATTTTACCAC TTGCTGAGTT TTTTATTATC AAAGCCGCAC AGCAAATTGG CCGTACCCAT
CTGAAGGTAA GCGATGACTG TCGTGATTTT ATTGAACATT ATCCATGGCC AGGTAATATC
CGTCAGTTAG AAAATGTACT GACACGTGCT GCTTCGTTGC TGGAAGGGGA TGAAATAGAA
ACTACACATC TACAGCTACC AGCTTATACC CGTGAACACG GTTATTTAGA ACAAGAGTTC
GAAGGAACAC TAGATGCTGC AGTTAAAAGC TTTGAAGCAG ATTTATTGCG TAAATTGTAT
CCAGCTTACC CAAGTACTAG ACAACTCGCT AAAAAGCTTG GCCTTAGTCA TACTGCAATT
GCAAACAAGT TACGTGAATA TGATATTAAT AAAAAGACTG TGAAAATTTA A
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| Protein sequence | MRLEITCHDR VGMGQKVLGI FVEHGINVRG IELMQPGRIF INIPSLDFSD LQTFMPQLRL
LEGVGDVKTA PYMPSERERN ELATLIKTFP DPFISIDRKG NIRIVNTIAS SIIGESETSL
VGQHISLWLK GFNFNRWLDA NDVLAQTRRL KFQGDDFVAD IMPIHVADEE HKQVLAGAVL
ILKSEARLGQ QMNVFKQPNE NTFSGIQASS SAMRKVIREA KRMSSLDSSI LIMGETGTGK
ELLARACHGA SERAENPFMT LNCAALPDDV AESELFGVGE KEQESSKRGI FELADGGTVF
LDEIGEMSAK LQSKLLRVIQ HGSFRRVDSE QEVTVNVRII SSTNKDLLNL VSIGDFREDL
YYRLNVFGLT LPALRERRSD ILPLAEFFII KAAQQIGRTH LKVSDDCRDF IEHYPWPGNI
RQLENVLTRA ASLLEGDEIE TTHLQLPAYT REHGYLEQEF EGTLDAAVKS FEADLLRKLY
PAYPSTRQLA KKLGLSHTAI ANKLREYDIN KKTVKI
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