Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3732 |
Symbol | |
ID | 3521829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3890497 |
End bp | 3891828 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637286179 |
Product | sugar:cation symporter family protein |
Protein accession | YP_270399 |
Protein GI | 71281357 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.170381 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAACAA TACGAGAAAA AATTGCCTAT GGCTTAGGTG ATACTGCCAG TAATATCATT TTTCAAACAG TGATGATGTT TTTGCTGATA TTTTATACCG ATGTCGTTGG TCTTTCTCCC GCGCTGGTGG GTACTTTATT TTTAGTGGTT CGACTTTTTG ATGCGATTAC TGACCCCTTA ATGGGGGCTA TGGCAGATAG AACTAAAACC CGATGGGGAC AGTTTAGGCC TTATATTTTA TGGTTAGCGG TGCCTTTTGG CATAATCTCA GTCATGGCAT TTACTACACC GGATTTTTCC TATAATGGAA AAGTTGTTTA TGCCTTTGCC ACCTACACTT TACTTATGAT TGCGTATACG GCGATTAATA TCCCGTATTC TGCATTAGGC GGTGTATTAA CAGCAGAGCC TTCTGAGCGT GTTTCTGTGC AATCTTATCG CTTTGTTTTA GGCATGTTAG GCGGGCTTAT TGTCGCAGCC AGTACACTTC CGTTAGTTGA GTGGTTTGGT GAAGGTGATA AAGCCAAAGG TTATCAATTA ACCATGATGG CGATGAGTCT TTTAGGTGTG GTGTTATTTT TATTATGCTT TAGTGGCACT AATGAAAGGG TCTCCACGCC TGCAGAGCAA AAAACGTCAT TTTTTGATGA CTTAAGATCA CTTTGGAAAA ATGACCAGTG GCGAATCTTA TGCTTAGCCG GTCTCTTTTT ATTAACGGGA CAAGTATTAA GAGCGACTTT AGCTATTTAT TATGTGAAAT ATGTTCTTAA TCTCGAACAG TATATAACTT TGTTTATTAC ACTCGGAATG ATTGGTAGTA TTTTAGGGTG TGCTTTGGCT CAACCCCTGG CCAAAAAAGT TTGTAAGATC AAAGCGTATA TAACGCTTCA ATTAATCGCA GCATTCATAT GTGTCATCAG TTATTTTGTC CCTAAAGAAT ATGACATCAT GGCCTTTGCA TTGTTTTTCC TTTGGAGTTT CTTTTTACAA ATGGCGACAC CATTGTTATG GGCCAAAATG GCCGATACCA TTGACTATGG CCACTGGAAA ACTGGTGTTC GTATTACGGG AATGGTTTAT TCTGCCGTGG TGTTTTTTAT TAAGCTGGGT GTCGCTTTTG GTGGCGCTTT TGCCGGTTGG TTGCTTGCTT ATTATGGCTA CCAAGCCGAT GTTGAACAGA CGGAGGCGAC TCAGCAAGGG ATCTTATTGT CCTTTACTGT TTATCCTGCA ATTGGCTCAA TTCTAGTAGC TTTAGTGATG CGTTGGTATG TTCTTGATAA TAAAAGGGTA GAGCAGATTC ATGGTGAGCT CAATGAAGCA CAACAAGCGT AA
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Protein sequence | MLTIREKIAY GLGDTASNII FQTVMMFLLI FYTDVVGLSP ALVGTLFLVV RLFDAITDPL MGAMADRTKT RWGQFRPYIL WLAVPFGIIS VMAFTTPDFS YNGKVVYAFA TYTLLMIAYT AINIPYSALG GVLTAEPSER VSVQSYRFVL GMLGGLIVAA STLPLVEWFG EGDKAKGYQL TMMAMSLLGV VLFLLCFSGT NERVSTPAEQ KTSFFDDLRS LWKNDQWRIL CLAGLFLLTG QVLRATLAIY YVKYVLNLEQ YITLFITLGM IGSILGCALA QPLAKKVCKI KAYITLQLIA AFICVISYFV PKEYDIMAFA LFFLWSFFLQ MATPLLWAKM ADTIDYGHWK TGVRITGMVY SAVVFFIKLG VAFGGAFAGW LLAYYGYQAD VEQTEATQQG ILLSFTVYPA IGSILVALVM RWYVLDNKRV EQIHGELNEA QQA
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