Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3590 |
Symbol | |
ID | 3522702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3727098 |
End bp | 3727901 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637286038 |
Product | IclR family transcriptional regulator |
Protein accession | YP_270258 |
Protein GI | 71282229 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAGC AAGAACAAGA AAAACATGAT GGTGATCAAG TTATGATCAA ATCAACCGAA ATTGTACAAT CATTACTCAA AGGTTTGGTG GTGATTCAGG CCTTTGATCA ACAAAGACCC ACGATGACCT TGTCTGAAGT TGCGACCGCT ACAGGTTATA CGCGCGCAGC AGCAAGACGA TTTCTACTAA CCTTAGTTAG TGAAGGTTAT GCTAAGCAAG AGGGAAAGCA GTTTTCGTTA ACGGCGAAAA TACTCAAGTT GGGTTTTTCA TACCTTGCTT CTCAAGATGT TTGGCAAAGC GCAAAACCTT TGATGCAACA GTTAGTTGAG CAACTTAATG AGTCTTGCTC GGCAGCGGTA TTAGACGGTG AAGATGTTGT CTACGTTGGG CGGGTTGCTA CCACTAAACG CATCATGTCT GTTAGTTTAA ATGTAGGTAC TCGCTTACCG GCATTTGCAA CCTCATTAGG TCGTGTACTG TTAGCGGACC TGAAAGATGA AGTATTAAAT GACTTTTTAA CAACCTGTCG CATAGAGCAA TATACTGCCT TCACCCTTAC TAACAAGGCG GAATTAGCCG CAGAAATTAC ACGGGTAAAT CAGCAAGGTT ATTCTTTGGT AGAACAAGAA TTAGAGCTGG GCTTAACCTC TATTTCTGTC CCCGTACGAA ATCAAGCAGG AAAAGTGCTT GGTGCGTTAA GTATCAGCAC GCATATTTCT CAAACAACGA GACAGCAAGT ATTAACGACC ATTTTGCCCA CGCTAAAAGC CTGTGCGGCT GCTATTGAAC AGCTAACTTA TTAA
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Protein sequence | MSKQEQEKHD GDQVMIKSTE IVQSLLKGLV VIQAFDQQRP TMTLSEVATA TGYTRAAARR FLLTLVSEGY AKQEGKQFSL TAKILKLGFS YLASQDVWQS AKPLMQQLVE QLNESCSAAV LDGEDVVYVG RVATTKRIMS VSLNVGTRLP AFATSLGRVL LADLKDEVLN DFLTTCRIEQ YTAFTLTNKA ELAAEITRVN QQGYSLVEQE LELGLTSISV PVRNQAGKVL GALSISTHIS QTTRQQVLTT ILPTLKACAA AIEQLTY
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