Gene CPS_3579 details

Gene Information

• Locus tag: CPS_3579
• ID: 3521709
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 3717211
• End bp: 3717897
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637286027
• Product: anti-oxidant AhpCTSA family protein
• Protein accession: YP_270247
• Protein GI: 71281238
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2077] Peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTTC CTACTTCAAA CATTGCCTTA TGTGCATTTT TTATCGCCAG TTTTACGATT 
GCTTTCACTA GCCATAGTGA TAATTTTGAC TCAAAAAAAC TTAAATCAAC ACAAAACCTA 
GTCAAAGCAG GAGATAAGTA TGTCACCCTG TTAGGCGAAC AGGTAAATGT TGGCGAGCAA 
GCTCCGCAGT TTAAAGTTGT AGATAAAAAC TTTGCACCGG TGACATTGGC AGACTTTCAA 
GGACAAACGG TACTTATTTC AGTAGTGCCA AGCTTAGATA CCGGTGTTTG TTCTATCCAA 
ACAAAACGAT TTAATGAAGA AGCAGCAAAG CTCCCTGAGA ATATTACCAT TTTAACCATC 
AGTAATGATT TGCCTTTTGC TCAAAAACGT TTTTGTGATG CTGAAAAAGT CGACAATATT 
AAAGTACTAT CCGATTCAGT TTGGCGTGAT TTTGGCACGA GCTATGGTTT ATTAATTAAG 
GATATGGGAC TACTTACCCG TGCCATATTT GTTATAAATA ACCAAGGAAA GATTGTTTAC 
AAAGAGCTAG TTGCTAACAT ATCACAACAT CCTAATTATG ATAAAGCGCT AGCTAAAGTT 
AGATATACGG CGCCTGTTAT CGTTATCGAT CCTGAAGCCG AAGTTGATGC GACTAAAGAA 
CTTCCCGTAA AAGAAACCGA AAAATAA 

 

Protein sequence

MNFPTSNIAL CAFFIASFTI AFTSHSDNFD SKKLKSTQNL VKAGDKYVTL LGEQVNVGEQ 
APQFKVVDKN FAPVTLADFQ GQTVLISVVP SLDTGVCSIQ TKRFNEEAAK LPENITILTI 
SNDLPFAQKR FCDAEKVDNI KVLSDSVWRD FGTSYGLLIK DMGLLTRAIF VINNQGKIVY 
KELVANISQH PNYDKALAKV RYTAPVIVID PEAEVDATKE LPVKETEK