Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3575 |
Symbol | corC |
ID | 3520749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3712244 |
End bp | 3713122 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637286023 |
Product | magnesium and cobalt efflux protein CorC |
Protein accession | YP_270243 |
Protein GI | 71280284 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4535] Putative Mg2+ and Co2+ transporter CorC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGATG ACACCCCCCA CTCTAGTAAC GGTTCAGCCA GTAAGTCCTT TTTAGATAAA GTTATGCAAG TATTAACGCC TGAACCGAAA AATAAAGATC AATTGATTGA TATATTAAAT GATGCTCAAG ACAGAGAATT AATCAATCCT GAAACCAAGC AAATGATTAA AGGTGTCTTA GACGTATCTG AAATGCGCGT ACGAGAGATT ATGATCCCAC GTTCTCAAAT GGTTACGATT GATATAAACC ATAGCCTTGA TGAGTTCTTA CCTATTATTC TAGAGTCTGG TCATTCACGT TTTCCCGTTG TTAATGAGGA TATCGATCAC GTTGATGGTA TTTTATTAGC GAAAGATCTA CTTGCTTTTG GCTTTAACTC TCAAAGTGAT AATTTTAGCT TAAGTGACGT TATTCGACCT GCTATTATTG TTCCTGAAAG TAAAAAGGTC GAACCTTTAT TAAAAGAGTT TCGTTCAAAT CGCTACCATA TGGCCATTGT TGTTGATGAA TACGGTGGTG TTTCCGGTGT TATCACCATC GAAGATATTT TAGAACAAAT TGTTGGTGAA ATTGAAGATG AAACCGATGA TGAAATTGAA GAAGAAATTA AGCACTTAGC AGGAAATGTT TATCTAGTAA AAGCGCTGAC CGAGCTTGGC GACTTCAATG ATTACTTTAA CTGTAATTTT AATGACACCA ATGCCGATAC CATTGGTGGT ATTGTTTTGC GTCAGTTTAA TCATATGCCA CAAAAAGGTG AACTATTTCG CTTAGGCAAC TTTGAATTTA AAGTGCTAGT AGCCGATAGT AGACGTATGC AAATGCTACA AGTAAGTGTT GATAAAGGTC ACGAAATTAA CGGTAAAGTG AGTGACTAA
|
Protein sequence | MSDDTPHSSN GSASKSFLDK VMQVLTPEPK NKDQLIDILN DAQDRELINP ETKQMIKGVL DVSEMRVREI MIPRSQMVTI DINHSLDEFL PIILESGHSR FPVVNEDIDH VDGILLAKDL LAFGFNSQSD NFSLSDVIRP AIIVPESKKV EPLLKEFRSN RYHMAIVVDE YGGVSGVITI EDILEQIVGE IEDETDDEIE EEIKHLAGNV YLVKALTELG DFNDYFNCNF NDTNADTIGG IVLRQFNHMP QKGELFRLGN FEFKVLVADS RRMQMLQVSV DKGHEINGKV SD
|
| |