Gene CPS_3558 details

Gene Information

• Locus tag: CPS_3558
• ID: 3520397
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 3696640
• End bp: 3697275
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637286006
• Product: 50S ribosomal protein L25/general stress protein Ctc
• Protein accession: YP_270232
• Protein GI: 71279934
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1825] Ribosomal protein L25 (general stress protein Ctc)
• TIGRFAM ID: [TIGR00731] ribosomal protein L25, Ctc-form

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.989428
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGATT TATTAACATT AGAAGCTGAA GTACGTACTG ATTTAGGGAA AGGTGCGAGC 
CGCCGCCTAC GTCACGCGAA CAAAGTTCCT GCTATCCTTT ACGGTGAAAA TGAAGAACCT 
ATTTCTTTAA CTTTAGAGCA CAAAAACGTT TTCCGTGCTC AACAAGAAGA AGCGTTCTAC 
TCGCAAGTAT TAACATTGAA CATCGCTGGC AAGCCAGTTG AATGTCTAAT TAAAGACATG 
CAACGTCATC CGTTCAAGCA AGTTGTAATG CACTTAGATT TCTTACGCAT TGATGCAAAG 
CATGCTGTTC ATGCAAACGC TCCTATTCAC TTCTTAAACG AAGATGAAGC GGCTAAAACT 
GGTGCGAACA TTTCTCACCA CATGAATGAA ATCGCTATCA CTTGTTTACC AAAAGACTTA 
CCTGAGTTCA TCTCAATTGA CTTAGCTGGT TTAGAACTTG GTCAAACTAT CCATTTATCA 
GACGTTACCT TCCCTGCAGG CGTTACTTCT GATGAATTGG CTAAAGGCGA AGATCACGAT 
CTAGCTGTTG TTTCTGCTAA TGCACCGAAA GCTGCAAAAG TAAGCACTGA CGATGAAGCT 
GCTGCTCCAG CAGAAGAAGC TCCAGCTGCT GAATAA 

 

Protein sequence

MTDLLTLEAE VRTDLGKGAS RRLRHANKVP AILYGENEEP ISLTLEHKNV FRAQQEEAFY 
SQVLTLNIAG KPVECLIKDM QRHPFKQVVM HLDFLRIDAK HAVHANAPIH FLNEDEAAKT 
GANISHHMNE IAITCLPKDL PEFISIDLAG LELGQTIHLS DVTFPAGVTS DELAKGEDHD 
LAVVSANAPK AAKVSTDDEA AAPAEEAPAA E