Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3554 |
Symbol | hemA |
ID | 3520815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3692178 |
End bp | 3693446 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286002 |
Product | glutamyl-tRNA reductase |
Protein accession | YP_270228 |
Protein GI | 71280349 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0373] Glutamyl-tRNA reductase |
TIGRFAM ID | [TIGR01035] glutamyl-tRNA reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0359238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCTATCG TTGCTGTTGG AATTAATCAT AAAACTGCGC CTGTTGCGGT CAGAGAGAAA ATATCTTTTA ATCCAGATAA GCTTTCTATT GCCCTTCAAG AAATGCTTAA TGCAGTACAG TGTCGTGAAG TTGCTATTCT TTCTACCTGT AATAGAACAG AGTTATACCT AGTACAAGAT GGTGACTTTG ATGTTACTCA GCAACGCCTA ATTAAATGGC TAGAAAGTTT CCATAACGTA CCCGCCTCGA CTATTTTACC TAGCCTATAT TGGCATAAAG ACCAGCAAGC CGTTAATCAT ATGATGCGCG TAGCCTGTGG TTTAGACTCT CTTGTTTTAG GCGAACCGCA AATCCTAGGG CAAATGAAAC AAGCTTATAG TCAAGCGAAA GCTGCTGGCT CTATGTCATT GATTATGGAC CGGTTATTTC AACGTACTTT TGGCGTAGCA AAACAAGTTC GCACAGAAAC TGAAATTGGT GCCAGTGCAG TATCTGTTGC CTTTGCTTCA GTAAACTTAG CCAAGCATAT TTTTGGCGGC CTTGAAAAAA CTAAAGTATT GCTTGTTGGT GCAGGTGAAA CTATTGAGTT AGTTGCAAAA CATTTATATG AAAATAATGT CGGTAAAATT ACCGTTGCTA ACAGAACACT TGCACGTGCT GAAAACATGG CAACGAAAAT TGGCGCTGAT GTTATTACTT TAGCGCAAAT ACCTGAACAT ATGTGTAATG CTGATATTGT TATCAGCTCT ACCGGATCTA CTTTACCTAT CATTGGTAAA GGCATGGTTG AGCAAGCGTT AGCGTCACGT AAGCATCAAC CTATTTTTAT GGTTGATCTT GCTGTTCCTC GTGATATTGA AGAACAAGTT TCAGAACTTG AAGATGTATT TTTATATACC GTTGATGACT TACAAGGCAT TATTGCTAAG AATATAGCCA ATCGACGTAA AGCTGCAGTT CAAGCTGAAA GCATTGTGAA TAGCCAGTCC GATAATTTTA TGGCATGGCT GCGCGGTTTA AATACGCAGG ACACTGTCAT TAGTTATCGT AAACAATGTT TAGATAACCG TGATGTTTTA CTCGAAAAAG CATTCATACA ATTAAAAAAT GGTAAAAATT CAGAAGCTGT TCTAGCTGAA CTTGCCAATA AACTTACCAA TAAATTCATG CATGCACCTA CCAGTGCTCT CCAGTCTGCT GCCCAAGGTG GTGAACTGGA TAAACTTATC TATTTACGTG ACATCTTTAA TATAGATTCA CAAGAGTAG
|
Protein sequence | MSIVAVGINH KTAPVAVREK ISFNPDKLSI ALQEMLNAVQ CREVAILSTC NRTELYLVQD GDFDVTQQRL IKWLESFHNV PASTILPSLY WHKDQQAVNH MMRVACGLDS LVLGEPQILG QMKQAYSQAK AAGSMSLIMD RLFQRTFGVA KQVRTETEIG ASAVSVAFAS VNLAKHIFGG LEKTKVLLVG AGETIELVAK HLYENNVGKI TVANRTLARA ENMATKIGAD VITLAQIPEH MCNADIVISS TGSTLPIIGK GMVEQALASR KHQPIFMVDL AVPRDIEEQV SELEDVFLYT VDDLQGIIAK NIANRRKAAV QAESIVNSQS DNFMAWLRGL NTQDTVISYR KQCLDNRDVL LEKAFIQLKN GKNSEAVLAE LANKLTNKFM HAPTSALQSA AQGGELDKLI YLRDIFNIDS QE
|
| |