| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3470 |
|---|
| Symbol | |
|---|
| ID | 3519033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3608587 |
|---|
| End bp | 3610476 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637285918 |
|---|
| Product | neutral zinc metallopeptidase M1 family protein |
|---|
| Protein accession | YP_270144 |
|---|
| Protein GI | 71278348 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATT TTTCAAAACT TTGCTTTTTA CTCAGCACTT TTGCTGTGTC TATAGCGCCA
GTTACATGGG CCCATGAAGG GGCCACTCAT CAACACGCTA ACGTGTCAAA GTTAACTGAT
GCCTATACTT ACGCTAATTA TGACCAAGTC AAAGCAACTC ATGTGTATCT TGATCTTAAT
GTTGATTTTG ATAAAAAATC GTTATCTGGT TTTGCAGAGT TATCACTTGA TTGGTTTACT
GATAATAAAG CGCCATTAAT CTTAGATACA CGTGATCTTG TTATTCACCG CGTGATGGCA
AAAAATAGCC AAGGCCAGTG GGTAAAGGTG AACTATGATT TAGCTAAACG CGATGACGTG
TTAGGTAGCA AGCTAACCAT TAATACGCCA TTAAATGCTA AAAAAGTTCG TGTATATTAT
AACTCAACAG AAAAAGCGAC AGGGTTACAA TGGTTGTCAG CTGAACAAAC TGCTGGTAAA
GAAAAACCCT TTCTATTTAG TCAAAACCAA GCAATCCATG CCCGTTCTTG GATACCTATC
CAAGATACAC CAAGTGTTCG AGTGACTTAT ACTGCACGTA TAACTACCGA TAAAGATTTA
TTGGCGGTAA TGAGCGCGAA TAACGAACCG GGTACTGAGC GCGATGGCGA CTATTTCTTT
TCAATGCCTC AAGCCATCCC ACCTTATTTA ATTGCGATTG GTGTGGGTGA CCTTGAGTTT
AAAGCGATGA GCCATCAAAC AGGTATTTAT GCGGAATCTT ATATTTTAGA TGCTGCTGTT
GCTGAATTTG ATGATACCCA AGCCATGATT GATAAAGCTG AACAAATGTA TGGCAAATAT
CGTTGGGGTC GTTACGACTT ATTGATGTTA CCTCCTAGTT TTCCTTTTGG TGGTATGGAA
AATCCACGTC TTTCATTTAT CACACCAACC GTTGTTGCGG GTGACAAAAG TTTAGTTAAC
CTAATTGCTC ATGAGCTTGC TCACTCATGG TCAGGAAACT TAGTTACTAA TGAAAGTTGG
CGTGATTTAT GGTTAAACGA AGGTTTTACC AGTTATGTTG AAAACCGTAT TATGGAAGCC
GTTTTTGGTA CGGACCGCGC AGTAATGGAA CAAGCATTGG GCGCACAAGA TCTAAATGCA
GAAATACTCG AACTTGATGC AAGTGATACT CAGCTATACA TCGATTTAAA AGGTCGAGAT
CCTGATGATG CCTTCTCTGG TGTACCTTAT GTTAAAGGGC AGTTATTTTT GATGTACCTA
GAAGAAAAGT TTGGTCGTGA GCGTTTTGAT GCATTCGTGT TAGAATATTT CGATAGCCAT
GCATTTCAAA GTTTAGGTAC GGATAACTTT GTTAAATATT TAAAAGCTAA CTTAACTGAT
AAATACCCTA ATATTGTTAG TGATAATGAA ATCAATGAGT GGATTTTCAA AGCAGGCTTG
CCGAGTTATG CACCGCAGCC TACTTCAAAT GCCTTTAAAG TTATTGATAA GCAAATTAAC
CAATTAGTAA CTGATGAGTT AACGTTAGAA CAGTTACCTA CAGCTCAGTG GACATTACAC
GAATGGTTGC ACTTTATTAA TAACTTACCT GTAGATTTAG ATCACCAGCG TATGGTGAAT
TTGGATAAAG CTTTCGACTT AACCAATAGC AGTAATGCTG AGATTGCTCA TGCTTGGTAC
CTATTATCAG TGCGTGCTGA TTACAAAGAG GTTTATCCTG CAATGGCTAA GTACCTAAAA
AGCATCGGTC GTCGTAAATT GATAGTGCCG TTATATAAAG AGCTTGCCAA AAATGCAGAA
AGCAAAGCGT GGGCAGTTGA GGTGTATAAA CAAGCTCGTC CAGGTTACCA TGGTTTAGCC
CAAGGTACCG TAGACGGTGT ATTGAAATAA
|
|---|
| Protein sequence | MKHFSKLCFL LSTFAVSIAP VTWAHEGATH QHANVSKLTD AYTYANYDQV KATHVYLDLN
VDFDKKSLSG FAELSLDWFT DNKAPLILDT RDLVIHRVMA KNSQGQWVKV NYDLAKRDDV
LGSKLTINTP LNAKKVRVYY NSTEKATGLQ WLSAEQTAGK EKPFLFSQNQ AIHARSWIPI
QDTPSVRVTY TARITTDKDL LAVMSANNEP GTERDGDYFF SMPQAIPPYL IAIGVGDLEF
KAMSHQTGIY AESYILDAAV AEFDDTQAMI DKAEQMYGKY RWGRYDLLML PPSFPFGGME
NPRLSFITPT VVAGDKSLVN LIAHELAHSW SGNLVTNESW RDLWLNEGFT SYVENRIMEA
VFGTDRAVME QALGAQDLNA EILELDASDT QLYIDLKGRD PDDAFSGVPY VKGQLFLMYL
EEKFGRERFD AFVLEYFDSH AFQSLGTDNF VKYLKANLTD KYPNIVSDNE INEWIFKAGL
PSYAPQPTSN AFKVIDKQIN QLVTDELTLE QLPTAQWTLH EWLHFINNLP VDLDHQRMVN
LDKAFDLTNS SNAEIAHAWY LLSVRADYKE VYPAMAKYLK SIGRRKLIVP LYKELAKNAE
SKAWAVEVYK QARPGYHGLA QGTVDGVLK
|
|---|
| |