| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3463 |
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| Symbol | putP |
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| ID | 3519260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3598944 |
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| End bp | 3600431 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637285911 |
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| Product | proline/sodium symporter |
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| Protein accession | YP_270137 |
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| Protein GI | 71279253 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCTATCG GTACCTTAAT TTCTTTAACT CTCTATTTTA TAACCATGCT ATTAATTGGT
TTATATTCTT ACAGAAAATC AACCAGCGAT GTTGCAGGCT ATATGTTAGG TGGTCGTAGT
CTATCGCCAA GTGTTGCTGC ATTATCTGCC GGCGCTTCTG ACATGAGTGG TTGGATGCTT
ATGGGATTAC CAGGCGCTAT GTATATAACG GGCATGAGCA GTATTTGGAT TGCTATTGGC
TTAGTGATTG GCGCATTTCT TAATTATTTG GTCGTTGCAC CACGCCTTAG AACCTATACC
GAGCTAGCAA ATGACTCGAT AACCCTACCT GATTTTTTCG AAAACAGATT TAATGATAAA
TCGCGTGTAT TAAGAATTGT ATCATCAGTC GTTATTGTGG TGTTTTTTAC CCTGTATACC
TCTAGTGGTA TTGTTGCTGG TGGCAAATTA TTTGAGAGCT CTTTTGGCTT GAATTATGAG
ATTGGTTTAT ATGTTACCGC TGGTGTAGTG GTTGCTTATA CTATGTTTGG TGGTTTTTTG
GCGGTAAGCT TAACTGATTT TGTTCAAGGC TGTATTATGT TTATTGCCTT AGTATTGGTT
CCTGTTGTTG CCATAAGTGA AGTCGGTGGT CTGGCCGAAA TGCAAAGTAG CATCGAGATG
ATAAACCCTG ATCTACTCAA TCTATTTAGT GGTGTTAGTG CTCTTGGTAT CATTTCAGCC
ATGGCTTGGG GGTTAGGTTA TTTTGGTCAG CCTCATATTA TTGTGCGTTT CATGGCGATT
AGAAGTGTAA AAGACATGCC AACCGCTCGT CGTATAGGTA TGAGTTGGAT GATTGTTTCT
ATTATTGGCG CGATGGCAAC AGGTTTTGCT GGTATTGCTT ATGTGGCTAA AACAGGCATC
AAGCTTGATG ATGCAGAAAC TATTTTTATA GTACTATCCC AATTATTATT TAGCCCATTA
ATCGCAGGCT TCTTACTAGC GGCAATTTTA GCCGCTATCA TGAGTACCAT ATCGTCTCAA
TTATTGGTGA CTTCGAGTTC GCTTACTGGT GATTTCTATC AAGCCTTTTT ACATAAAGAT
GCCAGTGAAA AACAATTAGT CTTAGTTGGC CGAATTTCTG TATTGATTGT TGCATTGGTC
GCTATTTATT TAGCGTACGA TCGTGACAGC AGTATATTAA GTCTAGTCAG TAATGCTTGG
GCTGGATTTG GAGCCGCCTT TGGACCTGTC ATTATTGGTT GTTTATATTG GAAAGATATG
ACGCGTAATG GCGCTTTAGC TGGCATTATT AGTGGCGCAG TAACTGTACT TATTTGGATT
TATGCACCTA TCACCATCGA TGGACAATCC CTTAGTGCTG TTATGTATGA AATAGTACCT
GGCTTTATTG TTTGTTCTCT AGCGATTTAT ATCGTAAGTA AACTATCACC TAAAGTAGAA
GAGAGTATCA GTACTACGTT TGATGAAATG TTAGAGATTC ATAAATAA
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| Protein sequence | MAIGTLISLT LYFITMLLIG LYSYRKSTSD VAGYMLGGRS LSPSVAALSA GASDMSGWML
MGLPGAMYIT GMSSIWIAIG LVIGAFLNYL VVAPRLRTYT ELANDSITLP DFFENRFNDK
SRVLRIVSSV VIVVFFTLYT SSGIVAGGKL FESSFGLNYE IGLYVTAGVV VAYTMFGGFL
AVSLTDFVQG CIMFIALVLV PVVAISEVGG LAEMQSSIEM INPDLLNLFS GVSALGIISA
MAWGLGYFGQ PHIIVRFMAI RSVKDMPTAR RIGMSWMIVS IIGAMATGFA GIAYVAKTGI
KLDDAETIFI VLSQLLFSPL IAGFLLAAIL AAIMSTISSQ LLVTSSSLTG DFYQAFLHKD
ASEKQLVLVG RISVLIVALV AIYLAYDRDS SILSLVSNAW AGFGAAFGPV IIGCLYWKDM
TRNGALAGII SGAVTVLIWI YAPITIDGQS LSAVMYEIVP GFIVCSLAIY IVSKLSPKVE
ESISTTFDEM LEIHK
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