Gene CPS_3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3453 
SymbolrrmJ 
ID3520225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp3588574 
End bp3589203 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content39% 
IMG OID637285901 
Product23S rRNA methyltransferase J 
Protein accessionYP_270127 
Protein GI71279764 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0293] 23S rRNA methylase 
TIGRFAM ID[TIGR00438] cell division protein FtsJ 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATA AAAAACACAA AGCGAGTAGT CAGCGTTGGT TAGATGAACA CTTTGATGAT 
GAATACGTAA AAAAAGCGCA ACGTTTAGGG TTACGCTCAC GTGCAGTTTT CAAACTTGAA 
GAGATCAATA TTAAAGATAG ATTGATTAAA CCAGGTATGA AAGTTGTCGA TTTAGGTGCA 
GCCCCAGGTG GTTGGTCAGA ATATGCTGTT AAGGTTGTAG GTGATAAAGG GCAGGTTGTT 
GCTTGTGATA TTTTACCTAT GGATGCCATT GTTGGTGTTG ACTTTCTTGA AGGTGACTTT 
AGAGAAGAAG AAGTACTTGA TGCATTATTG ACTCGTATAA ATGGCAAAAA TATTGACGTT 
GTTATGTCTG ATATGGCGGC GAATATGACT GGTAATGAAA GTGCTGATTC AGCGCGTAGT 
ATGTATCTTG TTGAGTTAGC ACTAGATATG TGTAGCCAAG TATTAAAACC TAATGGCGCA 
TTTGTGGTAA AAGTATTTCA AGGTGCTGGC TTTGAAGATT ACATGAAAGC GACCCGTGCA 
GTATTTAAAG CGGTTAAAAC CCGTAAGCCA GAATCTTCTA GAGCGCGTTC GAGAGAAGTA 
TATTTAGTGG CTACTGGCTA CAAAGGTTAG
 
Protein sequence
MANKKHKASS QRWLDEHFDD EYVKKAQRLG LRSRAVFKLE EINIKDRLIK PGMKVVDLGA 
APGGWSEYAV KVVGDKGQVV ACDILPMDAI VGVDFLEGDF REEEVLDALL TRINGKNIDV 
VMSDMAANMT GNESADSARS MYLVELALDM CSQVLKPNGA FVVKVFQGAG FEDYMKATRA 
VFKAVKTRKP ESSRARSREV YLVATGYKG