Gene CPS_3452 details

Gene Information

• Locus tag: CPS_3452
• Symbol: ftsH
• ID: 3519317
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 3586434
• End bp: 3588416
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637285900
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_270126
• Protein GI: 71279193
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.380893
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAAAA ATCTTATTTT ATGGTTAGTT ATTGCAGTTG TTTTGATGAG TGTATTTCAG 
AGTTTTTCTC CAAATACCAC AGAAGATCAA CAAATGGATT ACACCCGCTT TATTCAGGAT 
GTACGTCAAG GACAGATTCG CGATGCGAGT GTTGATAGAA ATGGCGTAAT CACGGGTGAA 
AAGCGTAGTG GCGAAGCATA CAAAACCGTT ATACCTGGTG GCTATGATCG TGATTTAATT 
AACGATCTTG TTAAACAGGG TGTTCGTGCT GAAGGTAAAT TACCTGAAGA AACGAGTTTC 
TTAACGACTA TTTTCGTTTC TTGGTTCCCA ATGATTTTGC TTATTGGTGT ATGGATTTTC 
TTCATGCGTC AAATGCAAGG TGGTGGCGGC AAAGGAGCTA TGTCTTTTGG TAAGTCTAAA 
GCACGTCAGT TAAGTGAAGA GCAAATCAAA ACGACTTTCG CCGATGTGGC TGGTTGTGAT 
GAAGCGAAAG AAGACGTTGC TGAATTAGTT GATTACTTGC GTGAACCTAG CCGTTTTCAA 
AAGCTTGGTG GGCGTATTCC ATCAGGTATT TTACTTGTCG GTCAACCAGG TACAGGTAAA 
ACCTTATTAG CGAAAGCTAT TGCTGGTGAA GCGAAAGTTC CTTTCTTTAC TATTTCAGGC 
TCAGACTTTG TTGAAATGTT TGTTGGTGTT GGTGCATCTC GTGTACGTGA CATGTTCGAA 
CAAGCTAAAA AAGCGGCTCC TTGTATTATC TTCATCGATG AAATCGATGC GGTAGGTCGC 
CAACGTGGCG CTGGTATGGG TGGTGGTCAT GATGAACGTG AGCAAACACT TAACCAAATG 
TTAGTTGAAA TGGATGGTTT TGAAGGTAAT GAAGGCGTTA TCGTTATTGC CGCAACTAAC 
CGTCCTGACG TATTAGACCC TGCATTACTT CGTCCTGGTC GTTTTGACCG TCAAGTAACC 
GTTGGTTTAC CTGATATTCG AGGTCGTGAA CAAATTCTTA AAGTACATAT GCGCAAAGTA 
CCATTAGGTG ATGATGTTAA AGCTGAAGTT ATTGCGCGTG GTACGCCAGG CTTCTCTGGT 
GCAGATTTAG CTAACTTAGT GAATGAAGCT GCTTTATGTG CTGCACGTAC GGCGCGTCGT 
GTTGTTAGCA TGAAAGAATT CGATGCTGCT AAAGACAAAA TAATGATGGG CTCAGAACGA 
AAATCAATGG TAATGAGTGA GTCTGAAAGA GAAATGACTG CTTATCATGA AGCTGGGCAT 
GCAATCATTG GTCGTTTAGT GCCAGATCAT GATCCTGTTT ATAAAGTGAG TATTATTCCT 
CGTGGCCGTG CTCTTGGTGT GACTATGTAC TTACCAGAAC AGGATAGATT TAGCCATTCT 
AAGCAACATC TAGAAAGTAA CATTTCTTCT TTATATGGTG GTCGTGTTGC CGAAGAAGTT 
ATTTACGGTA GTGATAAAGT TTCTACTGGT GCTTCGAACG ATATTGAGCG TGCAACTAAC 
ATTGCTCGCA AAATGGTAAC TCAATGGGGC TTATCTGAAA AAATGGGTCC TATGTTATTC 
GCTGAAGAAG AAGGTGAAGT ATTCTTAGGT CGTACGTCTG CAAAATCATT GCATATGTCT 
GATGAAACAG CGAAAACAAT TGATGAAGAA ATTAAATCAG TAATTAGCCG TAACTATCAA 
CGAGCAGAAG ACTTAATCAA AGCAAACATG GATGTATTAC ATGCCATGAA AGATTGTTTG 
ATGAAGTATG AAACGATTGA TGCCTTACAA ATTGATGACT TGATGGCTAG AACATCTGTT 
CGTCCTCCTG CTGGTTGGGA AGACAAAGGT GGTTCAAGCT CTAATTCGGA TGACAGCAAA 
GGTGATAAAG CTGCAGATGT TGAAGCGACG GATAAAGATG CTGAAACAAC TAGTGACCCA 
GAAGAAACTA GTCAAGTAAA ACCTGATACA ACTAAGCCAA GTGGTGATAC ACCAGCAAGC 
TAA 

 

Protein sequence

MAKNLILWLV IAVVLMSVFQ SFSPNTTEDQ QMDYTRFIQD VRQGQIRDAS VDRNGVITGE 
KRSGEAYKTV IPGGYDRDLI NDLVKQGVRA EGKLPEETSF LTTIFVSWFP MILLIGVWIF 
FMRQMQGGGG KGAMSFGKSK ARQLSEEQIK TTFADVAGCD EAKEDVAELV DYLREPSRFQ 
KLGGRIPSGI LLVGQPGTGK TLLAKAIAGE AKVPFFTISG SDFVEMFVGV GASRVRDMFE 
QAKKAAPCII FIDEIDAVGR QRGAGMGGGH DEREQTLNQM LVEMDGFEGN EGVIVIAATN 
RPDVLDPALL RPGRFDRQVT VGLPDIRGRE QILKVHMRKV PLGDDVKAEV IARGTPGFSG 
ADLANLVNEA ALCAARTARR VVSMKEFDAA KDKIMMGSER KSMVMSESER EMTAYHEAGH 
AIIGRLVPDH DPVYKVSIIP RGRALGVTMY LPEQDRFSHS KQHLESNISS LYGGRVAEEV 
IYGSDKVSTG ASNDIERATN IARKMVTQWG LSEKMGPMLF AEEEGEVFLG RTSAKSLHMS 
DETAKTIDEE IKSVISRNYQ RAEDLIKANM DVLHAMKDCL MKYETIDALQ IDDLMARTSV 
RPPAGWEDKG GSSSNSDDSK GDKAADVEAT DKDAETTSDP EETSQVKPDT TKPSGDTPAS