| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3434 |
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| Symbol | |
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| ID | 3521773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3573998 |
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| End bp | 3575617 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637285882 |
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| Product | GMC family oxidoreductase |
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| Protein accession | YP_270109 |
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| Protein GI | 71281302 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAT CGCAAGATAA CAACTTTGAC TACATCATAG TCGGAGCTGG CTCAGCGGGC
TGTGTTTTGG CGAATAGGTT AACTGAAGAC GGTAAATTTA ACGTCTGCTT GTTAGAAGCT
GGCAGTGATA ATAACTCTAT GTTAGTAAAA ACGCCGGGAG CATTTTCAGC CTTCATGTTT
TTGAAAAAAT TCAATTGGAG TTTTGATGCT AAACCTAGAA AAGATATTCG CAATGGTGAA
CCCCTCTTTG TTCCCAGAGG TCGAGGTTTA GGTGGCAGTT CAGCCACCAA TGCCATGCTA
TATATACGAG GGCAAAAACA AGATTATGAT CATTGGGCAG AATTAGGTAA TGAGGGTTGG
TCATTCGACG ATATTTTACC TTATTTTAAG AAGTCAGAAA CCAATAGCCG TGGTGAAAGT
GAACTGCACG GCGGCGCAGG TCCCTTGCAA GTAACAGATC GCCCAGCTTT TTATGAAATC
AGTAAACGAT ATATTGAGGC GAGCCAACAG GCGGGTTTCA AAGTGACTGA TGATTTTAAT
GGAAGTGATC AAGAAGGCGT AGGTTATTAC CAATGCACGA TAAAAGATGG CAAGCGTTGC
TCTGCTGCTC ATGCTTATTT GTTGCCAATA CTGTCTAGAC CTAACCTTAC CGTATTAACT
TATGCACAAG TGAGTAAGGT ACTACTGAAA GACAAACAAG CTTATGGTGT TGATGTTTAC
GTTAAAGGCG AAAAGAGAAC CTTATCAGCG AATAAAGAAG TCATCTTAAG TGGTGGTAGC
ATCGCTTCAC CACAGCTATT AATGTTATCC GGCATTGGAG ATAAGAGTGA ACTGACACAA
CACGGTATTG ATTGTGTGCA TGAACTTAAA GGCGTAGGCA AAAACTTACG TGAACATGTA
GATGCCTGTG TCTTAGTAAA AAGTAAAAAA ACAGACGGTT TTACCCTATC GGTTTCAAGT
TTACTGAAAA TGGTACCTGA TGGTATTAAC TACATCACGG GTAACAAAGG CAAACTTGCC
AACAGTATTT TAGAAGCTGG TGGTTTTATT AAGTCTACTG AGAAGGAAGA CAGACCCGAT
ATTCAGTTGC ATATGCTGCC TTTGTTATAT GACGATAATG GCAGAGATTT AAAACTGTTA
ACACAACATG GGTTTTCATG TCATGTCTGT GTACTACGCC CTGAAAGTAC CGGCACTGTG
TCATTAAAAT CAGCTAATTA TCAAGATGCA CCAGAAATAG ATTTCAACTT ATTTTCTGAT
AAAGAAGGAA AAGACAAAAC AGTCTTAATT GATGGCATGC GTCAGCTGCG TAAAATATTA
ACCGCGCCGG CATTAGCCCA ACATTATAGT AATGAAATGC ACCCGGGAAA TGCTTTTGAA
ACAGATGAGC AAATTTTTGC TAAAGCCAAA GAGCGTATAG GCACAGTTTT TCATCCCGTA
GGCACCTGTA AAATGGGTAA TGATGGCATG GCTGTGGTTG ATAATCAGCT CAAAGTACAC
GGTATTGATA AATTAAGAGT AATAGATGCT TCTATTATGC CAACACTTAT CAGTGGCAAT
ACCAACGCAC CGACGATGGC TATCGCCGAA AAAGTTGCAG ATATGATGCT GACACATTAA
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| Protein sequence | MNKSQDNNFD YIIVGAGSAG CVLANRLTED GKFNVCLLEA GSDNNSMLVK TPGAFSAFMF
LKKFNWSFDA KPRKDIRNGE PLFVPRGRGL GGSSATNAML YIRGQKQDYD HWAELGNEGW
SFDDILPYFK KSETNSRGES ELHGGAGPLQ VTDRPAFYEI SKRYIEASQQ AGFKVTDDFN
GSDQEGVGYY QCTIKDGKRC SAAHAYLLPI LSRPNLTVLT YAQVSKVLLK DKQAYGVDVY
VKGEKRTLSA NKEVILSGGS IASPQLLMLS GIGDKSELTQ HGIDCVHELK GVGKNLREHV
DACVLVKSKK TDGFTLSVSS LLKMVPDGIN YITGNKGKLA NSILEAGGFI KSTEKEDRPD
IQLHMLPLLY DDNGRDLKLL TQHGFSCHVC VLRPESTGTV SLKSANYQDA PEIDFNLFSD
KEGKDKTVLI DGMRQLRKIL TAPALAQHYS NEMHPGNAFE TDEQIFAKAK ERIGTVFHPV
GTCKMGNDGM AVVDNQLKVH GIDKLRVIDA SIMPTLISGN TNAPTMAIAE KVADMMLTH
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