Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3424 |
Symbol | mmsB |
ID | 3519526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3557828 |
End bp | 3558718 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637285872 |
Product | 3-hydroxyisobutyrate dehydrogenase |
Protein accession | YP_270099 |
Protein GI | 71278004 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0751599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAATA TTGCTTTTAT AGGTTTAGGA AATATGGGTG GCCCAATGGC CATCAACTTA GTCAAAGCCG GACATCAGGT TTGTGTTTTT GACTTATCAG AGCAAGCCGT TGCTAACGTA GTAGAGCAAG GTGCAACAAC GCAACCACAA GCCAGTGATT GTGTGAAAGA TGCTGAATTT ATTATTTCAA TGCTGCCTGC TGGCAAGCAT GTTGAAGCCG TATTTCTCTC AGAAAATGGC TTGATAAATC ATATCGCTAA AGGCGCTTTA GTTATTGACT CTTCTACCAT TGACTCTGCT ACTTCAATCA AAGTTGGTAC TGTTTTGTTA GAACAAGGTA TCAATTTTAT TGATGCTCCT GTTTCTGGTG GCGTAGGTGG TGCAACTGCC GGTACATTAA GCTTTATGGT TGGTGGCAGT GAAGCTGATT TTAACCAAGC TAAACCCGTT TTAGATACCA TGGGTAAAAA TGTTTTTCAT GCCGGTAATC ATGGCGCTGG TCAGGTGGCT AAAGCCTGTA ACAACATGCT GTTATCAGTA TTAATGTTAG CGACCTCTGA AGCTTTACAA CTAGGTATCA GCAATGGTTT AGATGCTTCC GTATTGTCAA ATATTATGAG TAGTAGTTCA GGCAGTAACT GGACTCTTGA TGTCTATAAC CCCTGCCCTG GTGTAATGGA AAATGTCCCA TCATCTAATG ATTATCAGGG TGGCTTTATG GTTGACTTGA TGGCTAAAGA TTTAGGCTTG GCGATGGATA CAGCGGTAAA AAGTCACTCA TCAACACCAA TGGGTGCATT AGCGCGTAGT TTATACGCTA TGCATGCTGC CAATGGTAAT GGTGCAAAAG ATTTCTCAAG TGCTTTTAAT CTTTTCAATC AAGCAAAGTA A
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Protein sequence | MANIAFIGLG NMGGPMAINL VKAGHQVCVF DLSEQAVANV VEQGATTQPQ ASDCVKDAEF IISMLPAGKH VEAVFLSENG LINHIAKGAL VIDSSTIDSA TSIKVGTVLL EQGINFIDAP VSGGVGGATA GTLSFMVGGS EADFNQAKPV LDTMGKNVFH AGNHGAGQVA KACNNMLLSV LMLATSEALQ LGISNGLDAS VLSNIMSSSS GSNWTLDVYN PCPGVMENVP SSNDYQGGFM VDLMAKDLGL AMDTAVKSHS STPMGALARS LYAMHAANGN GAKDFSSAFN LFNQAK
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