| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3419 |
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| Symbol | |
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| ID | 3520046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3550442 |
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| End bp | 3553996 |
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| Gene Length | 3555 bp |
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| Protein Length | 1184 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637285867 |
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| Product | sensory box sensor histidine kinase/response regulator |
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| Protein accession | YP_270094 |
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| Protein GI | 71279587 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.285921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGCGA ATTGGTTGCT GGTTAGCGTT AGTATTGGCT ATATAGGTCT GTTGTTTCTG
ATTGCTCATT TAGGTGGGAA ATATCGTAAT AAGCTAGAAG CAAAACAACA AACGATTATC
TATGCCTTAT CATTAGGTGT TTATTGTACT TCCTGGGGTT TTTTAGGTAC GACAGCACAA
GCCGCTAATC ACTCTTTTAC TTTCCTTTCT GTTTATTTAG CGCCCATTGT GCTGTTTGTT
TTTGCTTGGC CTTTCATTCA ACGTATTATA AAAACCAGTT TAAAGCTCAA AATTACCTCT
ATTGCCGATC TGTTATCAGC ACGCTTTGGT AAATCACAAA CCTTAGCAAT TATTATTACC
TTAGTCGCCT TAATAGGCAC CATGCCCTAT ATAGCACTGC AGCTAAAAGC GATTGTGAAT
TCCTATCAAA TATTACAAGA AACTCAAGAC CTACCTATTT GGCAAATTGG TTTAGTCGTT
AGCATTATCC TCGCTGTTTT CACCATTATT TTTGGTATTA GAACAATAGA CATTACCGAA
CGTCACCCCG GAGTTATGAT AGCAATTGCC TTTGAATCGC TGGTGAAGTT AATTGCTTTC
CTGTTAGTAG GTTTATTCGT CAGCTTTATT ATTTATGACT CACCTATGGA TATTTGGGAA
TTATCAAAAG ATCAGTTTGA TATTGAGAAA CAGTTTGAGT TCAGTAACCT GTTTGCTTTG
TTTGGCATGT TAATCATCGT CATGTCTGCT TTCTTATGTT TGCCAAGACA ATTTCAAGTA
ATGTTTGTTG AAATAAAAGA TAAAAAAACA AGCGGTATGG CAAGGTGGGT TTTACCGGTT
TATTTACTTA TTTTTGGCTT TTTTGCCGCT GTTCTCGGCT TAGCTGGTAA TTTAAATTAT
GGCAGTTCTC TCGCTGCAGA TGCTTATGTA CTATTTTTGC CTGCTTTGGA TGGCCAAGTG
TGGTTATCTT TATTTGCCTT TTTAGGCGCT GTTTCAGCAG CAAGTTCGAT GGTTATTGTT
TCAACTATTG CTCTTAGTAC CATGCTCAGT AATGAGATTG TGTTTCCGGT CATGTTTAAC
TTTTCACGCC AAAAGCAACA AGACTTTAAT CACTTTCAAT TACAGTTATT GTTTATCCGT
AAAACACTGG TACTGCTGGT TATTTTTCTA AGTTATGGCT TGTTATTGGT ATCACCTCCC
GATGCATTAT CATCATTAGG CGAAGTCGCT TTTGGCGCAA TAGCTCAAAT AGGTCCCGCT
TTATTTGTCG CATTTTATTG GCGTAGAGCA ACACTGGCGG GTGTGCTTGC AGGGATAATT
TGTGGTTTTA CTATTTGGAC GGTATTTAAT TTAATACCTC AATTAGGCAT ATATGCCCAC
CCTTTAGAAA ACACAGACTT ACCTAAAACG ACCGTAATAA CCCTTATTGG CTTGCTCATT
AATGTTATCG CGCTATGGCT TGTTTCTTTA GGTACAAGAC AAAGTATTCG AGAGCAAATG
CAAAGTGAAT TTTTCTATAC AGACAGAAAA AAAATCAAGT GGAGCCTGCC ATCGCAGCCC
AAAGTAGACA TTGTAGAGTT AGAGCTTTTA GTGGCTAGAT TTATAGGTGA AGAAAAAGCA
ACCAAGTGCT TTGAAAAGTT TCATTCGATG AATCAGACTA AGGACAACAA AAAATTTAAT
GAAGCGATAT TGTTTCATGC AGAAAACACT CTTGCCCGTG TCTTAGGATC AGCCTCAGCA
AAGTTGGTCA CGTCTCTGGC GATTAGTAGC CGCGGCATGG CCTTTGATCA AGTCGCTAAA
TTGGTAGAGG ATAACTCAAC TCAACAATTA GAGTTTAGTC GCACGGTATT ACAAAGTGCT
ATTGAAAATG TGAGCGAAGG CATTTCAGTT ATCGATAGCG AGCTAAAGTT AGTTGCTTGG
AATAAACAAT ACTTAGATAT TTTTAGCTAT CCAGAGGCAT TTATTTATAT TGGTTGCCCT
ATCAGTCAGC TAATACATTT CAATTTAAGT CAGCAAGGTT ATTTTGCTAA AGATATCGAT
TTACGCGTTA AAAAACGTAT TCAGTATATT ATGGAAGGTA GTCGCCATAA CACTGAATAT
AAACTAAAAA ATGGCAAAAA CATTCGTATA GAAGGCAGTC CAATTCCCGG TGGTGGTTTT
GTGATGATAT TCTCTGATAT TACTCAGTAT CGTCAGACAG AAGAGGTGTT GAAAGAAGAA
AATACCGATC TCGAATCAAG GGTACAATTT CGTACTGCCG AGCTTGAACA GGCAAACAAA
GAGTTGGCAC TTGCTAACCA TGAACTCATA CAAGCACAAA CTAAAGCTGA GCAAGCGCAC
GTCAAGAAAA GTCAGTATTT AAAAGCGTGT AGCCATGATT TATTACAACC GCTCTCAGCC
GCAAGGTTAT TTTCTTCCGC CATATCTTTA AGTCCAAGAG TCAGTAATGA AGAACGAGAA
CAAATAAAAA AGATAGATAA TTCTTTAGAG ATAGCAAATA GCTTGTTGCT AGATCTCAAT
GAAATAGCAC GTATAGAAAG TGGTAATATC ACGCCAACTA TTGAGCCCAT TGAAATCAAA
GAGCTTTTCA CTATGTTAGC CAATGAATTT AATGCCTTAA CAGATGAATA TCATGTAGAG
TTTCATTGTA AAATGAGTAA AACTTATGTG GCAAGTGACA TCACCTTACT AGCAAGAATT
GTACAAAACT TCCTCAGTAA TGCCTTCCGC TATGCCCATA GATGTGACAA GAAAAACCAG
AGTAAAGTAT TGTTGGGTTG TCGAAGACAA GGTAATGAAA TATCAATCCA AGTGTTCGAC
AACGGCCCTG GCATTCCGAT AGACAAACAA CAGCAAGTTT TTGACCAGTT TACTCAATTA
AACAATAGCA ATGTTATGGG CCCTAAAGGA CTTGGCTTAG GACTAAATAT TGCCCAGAGC
TTGGCGAATA TTCTTGAGCA CAAAATTGAT TTAAAATCGA AACCAGGTCA TGGCTGTTTG
TTTAGTGTTA ATGCACCGAT GACGCTAGCG CCTGCGGCAA AAGAGCAAAC ATTACCCCCT
GCGAGTATGA GTTTGCACGG TGTAGGCGTA TTGTGTATAG ACAATGAGCC CGCAATACTT
GATGGCATGT CTAAATTGTT GAGTGCATGG CAGTGTCAAG TTTTCACCGC TGTTGACGCC
CAGCAAGCCA GAGAGCTTTA TGCAAAACAC GAAGACGAGA TTGATATTTT ACTGGTCGAT
TATCAACTAG ACGGTTGCCA AGACGATAAC ACTATTATGG CTACTGATAT GCTGATCAGT
GAGAGGAATG ATAGTTCATG TTCAATTGAT CCCGTTAATG GCATAGGGCT TATTAAACAA
TTAAGAGCAA TGAGTCCTTA TGCACTGCCT GCCATTCTTA TTACCGCAAC GACAGGTGAA
AACCTGATGG CGTTAACTAA ACAGCATAAT ATTGGCTATT TACGCAAAAT AATCAGACCC
CTTGCTTTAC GTGCTTTAAT GAGCTCGTTA CTCACCGAAG AACTGGCAAA GAATTACTCA
CAAAATAATA CATAA
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| Protein sequence | MFANWLLVSV SIGYIGLLFL IAHLGGKYRN KLEAKQQTII YALSLGVYCT SWGFLGTTAQ
AANHSFTFLS VYLAPIVLFV FAWPFIQRII KTSLKLKITS IADLLSARFG KSQTLAIIIT
LVALIGTMPY IALQLKAIVN SYQILQETQD LPIWQIGLVV SIILAVFTII FGIRTIDITE
RHPGVMIAIA FESLVKLIAF LLVGLFVSFI IYDSPMDIWE LSKDQFDIEK QFEFSNLFAL
FGMLIIVMSA FLCLPRQFQV MFVEIKDKKT SGMARWVLPV YLLIFGFFAA VLGLAGNLNY
GSSLAADAYV LFLPALDGQV WLSLFAFLGA VSAASSMVIV STIALSTMLS NEIVFPVMFN
FSRQKQQDFN HFQLQLLFIR KTLVLLVIFL SYGLLLVSPP DALSSLGEVA FGAIAQIGPA
LFVAFYWRRA TLAGVLAGII CGFTIWTVFN LIPQLGIYAH PLENTDLPKT TVITLIGLLI
NVIALWLVSL GTRQSIREQM QSEFFYTDRK KIKWSLPSQP KVDIVELELL VARFIGEEKA
TKCFEKFHSM NQTKDNKKFN EAILFHAENT LARVLGSASA KLVTSLAISS RGMAFDQVAK
LVEDNSTQQL EFSRTVLQSA IENVSEGISV IDSELKLVAW NKQYLDIFSY PEAFIYIGCP
ISQLIHFNLS QQGYFAKDID LRVKKRIQYI MEGSRHNTEY KLKNGKNIRI EGSPIPGGGF
VMIFSDITQY RQTEEVLKEE NTDLESRVQF RTAELEQANK ELALANHELI QAQTKAEQAH
VKKSQYLKAC SHDLLQPLSA ARLFSSAISL SPRVSNEERE QIKKIDNSLE IANSLLLDLN
EIARIESGNI TPTIEPIEIK ELFTMLANEF NALTDEYHVE FHCKMSKTYV ASDITLLARI
VQNFLSNAFR YAHRCDKKNQ SKVLLGCRRQ GNEISIQVFD NGPGIPIDKQ QQVFDQFTQL
NNSNVMGPKG LGLGLNIAQS LANILEHKID LKSKPGHGCL FSVNAPMTLA PAAKEQTLPP
ASMSLHGVGV LCIDNEPAIL DGMSKLLSAW QCQVFTAVDA QQARELYAKH EDEIDILLVD
YQLDGCQDDN TIMATDMLIS ERNDSSCSID PVNGIGLIKQ LRAMSPYALP AILITATTGE
NLMALTKQHN IGYLRKIIRP LALRALMSSL LTEELAKNYS QNNT
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