Gene CPS_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3406 
Symbol 
ID3521214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3535199 
End bp3536131 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content40% 
IMG OID637285854 
Producthypothetical protein 
Protein accessionYP_270081 
Protein GI71280745 
COG category[S] Function unknown 
COG ID[COG3220] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.11414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTCATA ACTTGATAAC AAATCAAGCT AGCGCTAGAG AGTATTCACT CTCTAGCGCT 
GTTGACGGTA TCGCTCCACC TGATGATTTC CTCGGCTTTG GTTTAGGACT AAGAACAGAT
CATTTTCAAG ATGTGCTAGC AACTAAACCC AATATTGATT GGTTTGAAGT TGTCTCTGAA
AATTTTATGG TAGACGGTGG TAAACCCAAA CACTATTTAC ACGCAATCCG TGAGCTTTAT
CCTATGGTGA TGCACGGTGT CTCGTTGTCT ATTGGTTCAA CTGATCCGTT AAATATGCAG
TATTTACGGC AGTTAAAAGT CCTGGTAAAC GAACTACAGC CACAATGGAT TTCAGACCAT
CTTTGTTGGA CAGGCGTTAA TCAAACGAAC AGTCATGACC TATTGCCTTT ACCGTATAAC
GACGAAGCAT TAAATCATGT TTGCGATCGT GTTGACCAAG TTCAAAATTT TTTAGGCCGT
CCTATCCTTT TAGAAAACCT ATCTAGCTAC ATTACTTATA AAGAATCTGA AATGAGTGAA
TGGGACTTTT TCAATAATGT TGCTCGTCGC TCAGGCTGTA ACATTTTGTT AGATATAAAT
AATATATATG TCAGCGCACG AAATCATGAA TTTGACCCAC AAGATTATCT TGAAGGTATC
GACAAAGACA AGGTCAAGCA ATTTCATTTA GCGGGTCATA CTGATTACGG AAATTACGTT
ATTGATACCC ATGACCACCC AGTTGCTGAT CCTGTTTGGG CTCTATATAA ACAAGCATTA
CAAAGGTTTG GTTGGGTAAG CACTATGATT GAACGCGATG ATAATATTCC GCCGCTGGCT
GAGCTATTAG CTGAAGTTGA AACCGCACGG AACATTGCTT ACGATACTTT AGGTCAATTG
GAGCGAGTGA AGCAACGGGA GGTAGTAACG TAA
 
Protein sequence
MVHNLITNQA SAREYSLSSA VDGIAPPDDF LGFGLGLRTD HFQDVLATKP NIDWFEVVSE 
NFMVDGGKPK HYLHAIRELY PMVMHGVSLS IGSTDPLNMQ YLRQLKVLVN ELQPQWISDH
LCWTGVNQTN SHDLLPLPYN DEALNHVCDR VDQVQNFLGR PILLENLSSY ITYKESEMSE
WDFFNNVARR SGCNILLDIN NIYVSARNHE FDPQDYLEGI DKDKVKQFHL AGHTDYGNYV
IDTHDHPVAD PVWALYKQAL QRFGWVSTMI ERDDNIPPLA ELLAEVETAR NIAYDTLGQL
ERVKQREVVT