| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3404 |
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| Symbol | |
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| ID | 3519815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3530914 |
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| End bp | 3534318 |
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| Gene Length | 3405 bp |
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| Protein Length | 1134 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637285852 |
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| Product | Snf2 family protein |
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| Protein accession | YP_270079 |
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| Protein GI | 71279360 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAA ACACGTTTAC TCCTGAATTA CTTGAAAAAC ACTTTACCAA AAATGAATGG
AAAAAAGGCG CGAGAATTTT TCAGGCAAAT GGCGTTAAAA CCTGCGCCCT TGACGGTGAA
GTAATACGCG GTGTAGTTTT TAGTGAGCGC TCGCGCGAAT CAAGTTATTT AACGCGTTTA
GTCTTTGATG GTAAGTTTGG TGATATTGCC AGTTATTGTG ATTGTTATGT CGGTCGCGAT
TGTAAACATG GTTCAGCGTT AGCGCAGTGT TATATTCACG AACATTTTGA CCGAAACAGC
ATCGCTACCT CAGAAACAAT AATAGATAAA TGGCTTAACC GTTTTCAAGC TCAGCCAACT
AGATACCAGC CCAATACCCA GCAAAAATCA TTATTATACT TTTTAAAGCC CAACCCATAT
AACGAAGACG ACTTTTTAAC TTTAGGTATT AAGTCAGCTC GACCAAAAAA TAGTGGCGGT
TGGAATAGTT CTATTGGCAG TGAATATTCT GCCAGTTCGT TGATTAATAG TGCCTATGCG
AATGACGAGG ATGTTGCTGT ACTTACCGAG CTTATGCGTA CTAACCAGTA TGGCGATACC
ATTAAGTATT TTGATTTATT TGAACGCATT ATAAAAACTA ATCGTAGCTT TTGGCATACA
ACGTACGACT TAAGCGAGCC GGTGACGTTA AGTGAGCCAC TAGAAGCAGA ATGGCAGTGG
TTAGCGTTGG GCAACAGTTT ACATACGTTA AAGCTTGTTT TAATGCAGCC ATCAGAAAGT
ATTCGTATTA TCAAAGCACA GCCACTGTGT TTTTATGACG AAGAAAAAAA TTGCTTTGGA
AAAATTAATA CTAATACTCA ATGTGATTTT GAAGCAGGTT TACTTAATTC CCCTATTTTT
GAAGAAGATA AATTACCCTG GATAATGAGT AAATTATCTA TGTCCTTAGG TGATGCAGTG
AAGCGTTTGC CTAAACCTAA AACAAAATAC TCACAAGAGT TAACACAACC TGATGTGTAC
TTGCACTTTA CTACGCCAGT AGCCTCTAAT CGACAAACGG GTTATGTGCA GGTTAATTTT
TCCTATCAAG GTAATTTAGT TAATCCCCAT GATGAAAACG TTACGATTAC GCCATCAAAC
GTAACTAAGC TTAGTATTGA TAGTGATGCC CAGAGTGATG CCGATAGTAA TATTGAGAGT
GGTGCTTATA GTAATATTGA GGATGAAGTT GAGCGTGAAA ATGTAAGTCC ACGCGAGATA
AAAATTTATC GTGACTTAGC CTTTGAGCAA ACGGTTATTG ATAAATTGAC CACGCTGAAA
TTTAACCCTC AACCTAAACC TAAACGTTAC ACTTATACTA GTCAGGACGA TTTGAACAAA
AGTAAAACTC CTGAATTTGC CATGCTGATG CAAGGCAGTG TCTTGTGGCA ACGCTTTTTA
CATCAAGAAT TATCACCACT TGAAGATCTA GGCTGGCATA TTACTTTTGC TGATGATTTT
TATTATAAAG CGCTTTCTAC TGATAGCGTA TTTGATGCCG AAGTGATGGA AACCGATGAT
CATGACTTTT TCTCATTAGG GTTAAACTTA ACCATTGATG GTAAAAAAAT GCCTGCGTTT
CCTATTTTGC TTAGCGCTAT TGAGCAGCTA CCGAGATCAG CATTACTTGA CCGCGAAAAA
GAAGACCTTA TTTCTCCTGA CTCCCCTATT TATGTAGATT TAGACAATGG TGGTTTTGTT
GCCCTACGTT ATCAAAGCGT GCAGCCAATA TTAAAACAGT TCATTGAACT ATTTATGCCT
AATGCCTTAA GCCATGATGG CACTATAGAG CTATCGCGTT TTCAAGGGCA TCAAACGTTA
TCGATGTTAG ATGACCAAGG CATGATAGCA AAAGGCACAA GTAAGCTAAG AGCGCTGGCT
GATAAACTAA AAGACTTTCA ACAAGTAACT ACGATTCCTG TACCCGAAGG TTTAAACGCG
ACGTTAAGAA CTTATCAGCA CCAAGGACTA AACTGGTTAC AGTTTTTACG CGAATACCAA
TTAAACGGTA TTTTGGCTGA TGACATGGGT TTGGGTAAAA CCATTCAAAC CTTGGCGCAC
TTATTAATTG AAAAACAGCA AGGTCGACTG ACTAAACCGA TATTAATCGT TGCGCCTACC
AGTGTTATTT TTAACTGGGC TAATGAAATA GATAAATTTA CCCCTCAACT TTCTTATCAA
GTATTACACG GTAACAAACG TCATGAGCAA TTTGGCTGTC TTGAGGGCGT CGAAAATGGT
GAAAATCAGG TTGATATAAT CATCACCAGT TATGCGTTGA TTACTAAAGA TTTAGCACAT
TACACTGACC GAAAATTTTA TTACCTTGTG CTTGATGAAG CCCATTATAT AAAAAATACC
AAAACTAAAT TATACCAAGC GTTTCTGACA CTAAAAGCGC AGCATAAATT GTGCTTAACG
GGTACGCCGA TGGAAAATCA TTTAGGCGAA TTCTGGGCAC AATTTAATTT TTTACTGCCT
GGTTTTTTAG GCGGACAAAG ACAATTTACT AAACTCTTTA GAACACCTAT AGAAAAACAT
GGTGAGCTAG AGCGTAAGCA GTTATTAAAT CAGCGTATTA AGCCGTTTAT TTTACGTAGA
ACCAAAGACA AAATAGCCAC TGAATTACCA CCAAAAACTG AAATAATTCA AACCTTGCGT
ATTGAAGGGA AACAAGCTGA GTTGTATGAA TCGGTGCGCT TAGCGATGGA TAGTCGCTTA
AAAGATATTA TTGCTGATAA AGGTTTAAAA CGCAGTCAGA TAGAAGTATT GGATGCGTTA
TTAAAACTAA GACAGGTATG TAATCATCCT AAGTTATTGA AACTTGAAGG CGCTAAAAAA
GTAAATCAAT CCGCTAAGCT TGATTATTTA ATGGAAACAC TGCCAGAGCA AATAGATGAA
GGCCGTAAAA TATTAATCTT TTCACAGTTC ACCAGCATGC TCTCTTTAAT AGAGGATGAG
TTGATCGATG CAGGTATTGG TTATGTTAAA TTAACGGGCT CAACCACTAA AAGACAAGAG
GTAGTTGATA AGTTTCAACG CGGTGAAGTG CCGGTATTTT TAATTAGCTT ACGCGCTGGT
GGTGTAGGTT TGAACTTAAC AGCAGCCGAT ACGGTTATTC ATTTTGATCC TTGGTGGAAC
CCAGCAGTAG AAAACCAAGC CACTGATAGA GCTTATCGAA TTGGACAAAA CAAACCTGTG
TTTGTTTACA AATTGATTAT TGAAAACTCT ATAGAAGAAA AGATTCAAAA AATTCAGCAA
AACAAAGCCG AACTCGCCAA AGCCTTGCTA TCTGAAGAAG TCAGTGATAA TAAGCTGAGT
TTAACTGACG ATATCTTGGA CTCGCTACTT ACACCACTGA GCTAG
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| Protein sequence | MAKNTFTPEL LEKHFTKNEW KKGARIFQAN GVKTCALDGE VIRGVVFSER SRESSYLTRL
VFDGKFGDIA SYCDCYVGRD CKHGSALAQC YIHEHFDRNS IATSETIIDK WLNRFQAQPT
RYQPNTQQKS LLYFLKPNPY NEDDFLTLGI KSARPKNSGG WNSSIGSEYS ASSLINSAYA
NDEDVAVLTE LMRTNQYGDT IKYFDLFERI IKTNRSFWHT TYDLSEPVTL SEPLEAEWQW
LALGNSLHTL KLVLMQPSES IRIIKAQPLC FYDEEKNCFG KINTNTQCDF EAGLLNSPIF
EEDKLPWIMS KLSMSLGDAV KRLPKPKTKY SQELTQPDVY LHFTTPVASN RQTGYVQVNF
SYQGNLVNPH DENVTITPSN VTKLSIDSDA QSDADSNIES GAYSNIEDEV ERENVSPREI
KIYRDLAFEQ TVIDKLTTLK FNPQPKPKRY TYTSQDDLNK SKTPEFAMLM QGSVLWQRFL
HQELSPLEDL GWHITFADDF YYKALSTDSV FDAEVMETDD HDFFSLGLNL TIDGKKMPAF
PILLSAIEQL PRSALLDREK EDLISPDSPI YVDLDNGGFV ALRYQSVQPI LKQFIELFMP
NALSHDGTIE LSRFQGHQTL SMLDDQGMIA KGTSKLRALA DKLKDFQQVT TIPVPEGLNA
TLRTYQHQGL NWLQFLREYQ LNGILADDMG LGKTIQTLAH LLIEKQQGRL TKPILIVAPT
SVIFNWANEI DKFTPQLSYQ VLHGNKRHEQ FGCLEGVENG ENQVDIIITS YALITKDLAH
YTDRKFYYLV LDEAHYIKNT KTKLYQAFLT LKAQHKLCLT GTPMENHLGE FWAQFNFLLP
GFLGGQRQFT KLFRTPIEKH GELERKQLLN QRIKPFILRR TKDKIATELP PKTEIIQTLR
IEGKQAELYE SVRLAMDSRL KDIIADKGLK RSQIEVLDAL LKLRQVCNHP KLLKLEGAKK
VNQSAKLDYL METLPEQIDE GRKILIFSQF TSMLSLIEDE LIDAGIGYVK LTGSTTKRQE
VVDKFQRGEV PVFLISLRAG GVGLNLTAAD TVIHFDPWWN PAVENQATDR AYRIGQNKPV
FVYKLIIENS IEEKIQKIQQ NKAELAKALL SEEVSDNKLS LTDDILDSLL TPLS
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