Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3394 |
Symbol | |
ID | 3520972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3523632 |
End bp | 3524387 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637285842 |
Product | hypothetical protein |
Protein accession | YP_270069 |
Protein GI | 71280506 |
COG category | [R] General function prediction only |
COG ID | [COG1073] Hydrolases of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.689408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAACGA AAGTTGAGTT TCCTAGCCAA GATCAATATC TAGCTGGTTT GTTAGAAACG CCAGAGCAAA AAATACGAGC CTATGTTTTG TTTGCTCATT GCTTTACCTG TGGTAAAGAT GTGGCTGCAG CATCAAGAAT TAGTCGATTT TTGGTGCAAC ATGGTTTTGC TGTGTTTCGA TTTGACTTCA CTGGCTTAGG GAATAGTGAC GGTGATTTCG CTAATACTAA TTTCTCATCT AATACTGAAG ATTTAGTGTC AGCTGCATAT TTTCTTGAAC AGAATTATGA GGCACCTCAA CTTTTAATAG GTCACAGTCT TGGCGGCGCG GCTGTTTTAG CAATGGCTTC ACAACTTCCT AAAGTCAAAG GTGTAGTAAC AATTGGTGCC CCGTATGAAG CAAGTCATGT CATACATAAC TTTGATGCAC ACCTCGAAAA AATAGATCAA AGTGGCTCGG CGAAAGTTAG TTTAGGCTCA CGTGAATTTA CCATTAAGAA ACAATTTTTG GATGATTTAC GTAACCAAAC GACAGAACAT ATTCAGCATC TTAATAAAGC TTTATTGGTA TTACATTCAC CGATAGATTT AACTGTAGAT ATTTCAGATG CAGAGAAAAT TTACAAGGCT GCAAAACACC CTAAAAGTTT CGTTAGCCTA GACACAGCGG ATCACCTTTT ATCAAAATCA ATCGATAGTG AATATGTCGC TCAAACAATT TCAGGGTGGG CGAGTCGCTA TATTCCATCA CCTTAA
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Protein sequence | MRTKVEFPSQ DQYLAGLLET PEQKIRAYVL FAHCFTCGKD VAAASRISRF LVQHGFAVFR FDFTGLGNSD GDFANTNFSS NTEDLVSAAY FLEQNYEAPQ LLIGHSLGGA AVLAMASQLP KVKGVVTIGA PYEASHVIHN FDAHLEKIDQ SGSAKVSLGS REFTIKKQFL DDLRNQTTEH IQHLNKALLV LHSPIDLTVD ISDAEKIYKA AKHPKSFVSL DTADHLLSKS IDSEYVAQTI SGWASRYIPS P
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