Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3354 |
Symbol | |
ID | 3523083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3480846 |
End bp | 3482054 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637285803 |
Product | hypothetical protein |
Protein accession | YP_270030 |
Protein GI | 71282608 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.787114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAACAG GTAATTATTG GGCGTTTACC TTAACAGATG GCGCGTTACG CATGCTTGTT GTGCTGTATT TTCATCAGTT AGGTTACAGC CCGTTTAATA TTGCCATGCT GTTTTTATTT TATGAAATCT TTGGTGTTAT CACTAACCTT ATTGGTGGGT GGTTAGGCGC AAGGCTTGGG TTAAATAAAA CCATGAATAT TGGTTTAGCC TTGCAGATAA TCGCGCTGGC TATGTTGGCC GTTCCTGCTG AAATGCTAAC CGTTATCTAT GTCATGGTTG CTCAGGCATT GTCAGGTATT GCTAAAGATT TGAATAAAAT GAGTGCTAAA AGCTCGATTA AATTACTGGT GCCTGAAGGA GCAGAAGGTA AACTCTATCA ATGGGTTGCT ATTCTTACTG GCTCTAAAAA CGCCTTAAAA GGTGTTGGGT TCTTTTTAGG TGGATTATTA CTTACTTTAC TTGAATTCAA CGGTGCAATT ATTTTAATGG CTTCACTATT AACTATAGTG TGGCTATTTA GTTTATTCGC ATTGAAAGAA GATTTAGGTA AAGCGAAAAA CAAACCTAAA TTTAAAGATA TTTTCTCTAA AAGTGCGTCA ATCAACATAC TCTCTGCTGC ACGACTGTTC TTATTTGGCG CGAGAGATGT TTGGTTTGTT GTCGCATTAC CTGTGTTTTT AGCGGTATCT TTTGATTGGG ACCATTGGGC CGTTAGTGGT TTTATGGCAA GTTGGATCAT TGGTTACGGT CTCGTTCAAT CTGCTGCGCC CTATATTACA AACAGAGGTA CAAATAGTGG TACCTCAAAA ACGACAGTTA AGGGCAGGGG AATACAACAA GGTAACGCTC CTACGGGCAG AGATGCATTC TTATGGGCGA GTTATTTAAC CCTAATACCT GCGGCTATTG CTTTGGCATT ACATTTCAAT TTTCACGTGC AAGCTTCTCT TATTATCGGA TTACTCATCT TTGGTGCAGT TTTCGCTATC AATTCTTCCC TACATAGTTA TCTTATCGTT AGTTATGCTG GAAGTGATGG TGTATCCCTT GATGTTGGTT TTTATTATAT GGCTAATGCC ATGGGCAGGT TAATAGGTAC CGTGCTGTCA GGTTGGGTAT ATCAAAACTA TGGTTTGGAA GCCTGTTTGT GGATATCAAG TGTATTTGTT GCAATGGCTA CCTTGCTGTC TCTAAAATTG AAACAATAG
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Protein sequence | MITGNYWAFT LTDGALRMLV VLYFHQLGYS PFNIAMLFLF YEIFGVITNL IGGWLGARLG LNKTMNIGLA LQIIALAMLA VPAEMLTVIY VMVAQALSGI AKDLNKMSAK SSIKLLVPEG AEGKLYQWVA ILTGSKNALK GVGFFLGGLL LTLLEFNGAI ILMASLLTIV WLFSLFALKE DLGKAKNKPK FKDIFSKSAS INILSAARLF LFGARDVWFV VALPVFLAVS FDWDHWAVSG FMASWIIGYG LVQSAAPYIT NRGTNSGTSK TTVKGRGIQQ GNAPTGRDAF LWASYLTLIP AAIALALHFN FHVQASLIIG LLIFGAVFAI NSSLHSYLIV SYAGSDGVSL DVGFYYMANA MGRLIGTVLS GWVYQNYGLE ACLWISSVFV AMATLLSLKL KQ
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