Gene CPS_3341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3341 
Symbol 
ID3521072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp3466354 
End bp3466986 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content38% 
IMG OID637285790 
ProductTetR family transcriptional regulator 
Protein accessionYP_270017 
Protein GI71280604 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.113479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAGA CTCTAACGTC ACAACGTAAA GCGCCAAGTC AAAAACGTGC TCAAACCACA 
GTAAAAAGAG TGCTAGAGGG CACTTTGCAA CTGTTAAAGG AGCAAGGCGC TGATGCTATT 
ACGACACGTA ATATATCAAA AATTACTGGC GTTAGTCCTG GTTCTATTTA TCAGTATTTT 
GGCAATAAAG AGCAAATTTT GTTCACCCTT TATGGAGAGC GATTAAAAGA CTCTGTAGGC 
ATTTTTAAAT TAGTATCAAC CAAAGAAAAC CTTGCGTTAC CCTTAGCTGA TTTCTGGGCA 
TTACTAGGTC AAGCTCTAGT TGATGTAGGC TGGGGAAGAG TTGAAGATGT AGAGTTAACA 
AAAGCTATTG CTGAAAGTCC TTTAGTAAAA GAGGCTGTAA AGCCTATTTT AGATGAGCTT 
TATGATGGCC TAATCTATAT TATGCGTAGC TATGGCTCAA CTTGGCCTGA GGAAGATCTT 
AAACATTTAG CCGAATATGC TTTTGGTATT AACCATTTCG GCTATAACTT ACGAATTCGT 
CAAAGTGGCC AAGCGGCAGA TAAAACTTTA GTGTTAACTC GTGAGATTGA ATATTATCTA 
ATTTGTAAAG CCGTTAATGA AACTCCACCA TAA
 
Protein sequence
MTETLTSQRK APSQKRAQTT VKRVLEGTLQ LLKEQGADAI TTRNISKITG VSPGSIYQYF 
GNKEQILFTL YGERLKDSVG IFKLVSTKEN LALPLADFWA LLGQALVDVG WGRVEDVELT 
KAIAESPLVK EAVKPILDEL YDGLIYIMRS YGSTWPEEDL KHLAEYAFGI NHFGYNLRIR 
QSGQAADKTL VLTREIEYYL ICKAVNETPP