Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3316 |
Symbol | |
ID | 3522718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3439182 |
End bp | 3440567 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637285765 |
Product | putative nitrate ABC transporter, periplasmic nitrate-binding protein |
Protein accession | YP_269992 |
Protein GI | 71282245 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.163343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTGGA AAAAACCTAT AACCTCTAGC CTAAAAAGTT TGTCGCTGAG CATTGCACTC GTTTGTGCGG GCACTTATAT CGCTCATGCT GAAACGGTTG GCGAACCAGA AAAGGAAGAG TTGAAGTTCG GTTTTATTAA ATTAACTGAT ATGGCGCCGA TTGCTATCGC TTATGAAAAC GGCTACTTCG AAGACGAAGG TTTATATGTC ACGATTGAAG CACAAGCTAA CTGGAAAGTA CTATTAAATG GTGTGATTGA TGGCACGTTA GATGGTGCGC ATATGCTTGC GGGTCAACCT ATTGCAGCCA CTATGGGATA CGGTACTAAA GCACACATAA TTACGCCTTT TTCAATGGAT CTAAATGGTA ATGCCATTAC CGTTTCAAAC GATATCTGGA AAAAAATGAA GCCAAACATT CCTAAAATGG CGGATGGCAG ACCTGTTCAT CCAATTAAGG CTGATTCATT AAAGCCCGTT ATAGAATCGT TAGCTTCAGA AGGTAAGCCC TTTAAGATGG GCATGGTCTT TCCTGTTTCG ACACATAACT ACGAGTTACG TTATTGGTTA GCTGCCGGCG GAATACACCC TGGTTATTAT GCTCCACACA AAGGGGATAA CTCAGGACAG ATTGATGCAC AAGCCTTACT TTCAGTCACT CCGCCACCAC AAATGCCATC AACAATGGAA GCCGGTACTA TTCATGGTTA CTGTGTCGGT GAACCTTGGA ACCAACAAGC CGTGTTTAAA GGTATTGGTG TACCTGTGGT GACTGATTAT GAAATATGGA AAAACAACCC TGAAAAAGTT TTTGGTATCA CAGCCGCTTT CGCTGAAAAG TACCCGAACA CTACTATTCG TTTAACACGT GCGCTTATTC GAGCCGCTAA ATGGTTAGAC GACAACAGTA ATGCGAACCG TCCTGCAGCG GTGAAAATAT TGTCTCAATC TAATTATGTT GGTGCTGATT ACGATGTTAT TGCTAACTCA ATGACAGGTA CTTTTGAATA TGAAAAGGGT GATAAACGAG CAGTGCCTGA TTTCAACGTA TTCTTTAGAT ATAACGCAAC CTACCCATAT TACTCTGATG CTATTTGGTA CCTAACGCAA ATGCGTCGTT GGGGGCAGAT TTCGGATGAT AAAAGTGATC AATGGTACAA AGACTTAGCA GCAAAAGTAT ATCGTCCTGA TATATACGCT AAAGCGGCTC AATCATTAAT TGACGATAAG TTAATTCCTG CAAATGAGTT TCCAGACTTT ACTAAAGAAA ACGGTTTTAA AGCACCACAA CAACACTTTA TAGACGATAT TGTTTATGAC GGAAATCAAC CTAATGCTTA TTTGGAAAAA TTTAAACTGG GTCTTAAAAA GGGTGACAAG CTTTAA
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Protein sequence | MNWKKPITSS LKSLSLSIAL VCAGTYIAHA ETVGEPEKEE LKFGFIKLTD MAPIAIAYEN GYFEDEGLYV TIEAQANWKV LLNGVIDGTL DGAHMLAGQP IAATMGYGTK AHIITPFSMD LNGNAITVSN DIWKKMKPNI PKMADGRPVH PIKADSLKPV IESLASEGKP FKMGMVFPVS THNYELRYWL AAGGIHPGYY APHKGDNSGQ IDAQALLSVT PPPQMPSTME AGTIHGYCVG EPWNQQAVFK GIGVPVVTDY EIWKNNPEKV FGITAAFAEK YPNTTIRLTR ALIRAAKWLD DNSNANRPAA VKILSQSNYV GADYDVIANS MTGTFEYEKG DKRAVPDFNV FFRYNATYPY YSDAIWYLTQ MRRWGQISDD KSDQWYKDLA AKVYRPDIYA KAAQSLIDDK LIPANEFPDF TKENGFKAPQ QHFIDDIVYD GNQPNAYLEK FKLGLKKGDK L
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