Gene CPS_3316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3316 
Symbol 
ID3522718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3439182 
End bp3440567 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content41% 
IMG OID637285765 
Productputative nitrate ABC transporter, periplasmic nitrate-binding protein 
Protein accessionYP_269992 
Protein GI71282245 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.163343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTGGA AAAAACCTAT AACCTCTAGC CTAAAAAGTT TGTCGCTGAG CATTGCACTC 
GTTTGTGCGG GCACTTATAT CGCTCATGCT GAAACGGTTG GCGAACCAGA AAAGGAAGAG
TTGAAGTTCG GTTTTATTAA ATTAACTGAT ATGGCGCCGA TTGCTATCGC TTATGAAAAC
GGCTACTTCG AAGACGAAGG TTTATATGTC ACGATTGAAG CACAAGCTAA CTGGAAAGTA
CTATTAAATG GTGTGATTGA TGGCACGTTA GATGGTGCGC ATATGCTTGC GGGTCAACCT
ATTGCAGCCA CTATGGGATA CGGTACTAAA GCACACATAA TTACGCCTTT TTCAATGGAT
CTAAATGGTA ATGCCATTAC CGTTTCAAAC GATATCTGGA AAAAAATGAA GCCAAACATT
CCTAAAATGG CGGATGGCAG ACCTGTTCAT CCAATTAAGG CTGATTCATT AAAGCCCGTT
ATAGAATCGT TAGCTTCAGA AGGTAAGCCC TTTAAGATGG GCATGGTCTT TCCTGTTTCG
ACACATAACT ACGAGTTACG TTATTGGTTA GCTGCCGGCG GAATACACCC TGGTTATTAT
GCTCCACACA AAGGGGATAA CTCAGGACAG ATTGATGCAC AAGCCTTACT TTCAGTCACT
CCGCCACCAC AAATGCCATC AACAATGGAA GCCGGTACTA TTCATGGTTA CTGTGTCGGT
GAACCTTGGA ACCAACAAGC CGTGTTTAAA GGTATTGGTG TACCTGTGGT GACTGATTAT
GAAATATGGA AAAACAACCC TGAAAAAGTT TTTGGTATCA CAGCCGCTTT CGCTGAAAAG
TACCCGAACA CTACTATTCG TTTAACACGT GCGCTTATTC GAGCCGCTAA ATGGTTAGAC
GACAACAGTA ATGCGAACCG TCCTGCAGCG GTGAAAATAT TGTCTCAATC TAATTATGTT
GGTGCTGATT ACGATGTTAT TGCTAACTCA ATGACAGGTA CTTTTGAATA TGAAAAGGGT
GATAAACGAG CAGTGCCTGA TTTCAACGTA TTCTTTAGAT ATAACGCAAC CTACCCATAT
TACTCTGATG CTATTTGGTA CCTAACGCAA ATGCGTCGTT GGGGGCAGAT TTCGGATGAT
AAAAGTGATC AATGGTACAA AGACTTAGCA GCAAAAGTAT ATCGTCCTGA TATATACGCT
AAAGCGGCTC AATCATTAAT TGACGATAAG TTAATTCCTG CAAATGAGTT TCCAGACTTT
ACTAAAGAAA ACGGTTTTAA AGCACCACAA CAACACTTTA TAGACGATAT TGTTTATGAC
GGAAATCAAC CTAATGCTTA TTTGGAAAAA TTTAAACTGG GTCTTAAAAA GGGTGACAAG
CTTTAA
 
Protein sequence
MNWKKPITSS LKSLSLSIAL VCAGTYIAHA ETVGEPEKEE LKFGFIKLTD MAPIAIAYEN 
GYFEDEGLYV TIEAQANWKV LLNGVIDGTL DGAHMLAGQP IAATMGYGTK AHIITPFSMD
LNGNAITVSN DIWKKMKPNI PKMADGRPVH PIKADSLKPV IESLASEGKP FKMGMVFPVS
THNYELRYWL AAGGIHPGYY APHKGDNSGQ IDAQALLSVT PPPQMPSTME AGTIHGYCVG
EPWNQQAVFK GIGVPVVTDY EIWKNNPEKV FGITAAFAEK YPNTTIRLTR ALIRAAKWLD
DNSNANRPAA VKILSQSNYV GADYDVIANS MTGTFEYEKG DKRAVPDFNV FFRYNATYPY
YSDAIWYLTQ MRRWGQISDD KSDQWYKDLA AKVYRPDIYA KAAQSLIDDK LIPANEFPDF
TKENGFKAPQ QHFIDDIVYD GNQPNAYLEK FKLGLKKGDK L