Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3286 |
Symbol | |
ID | 3520359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3412608 |
End bp | 3413147 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637285735 |
Product | DNA-binding protein |
Protein accession | YP_269962 |
Protein GI | 71279897 |
COG category | [K] Transcription |
COG ID | [COG1476] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.414425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAACC CTATTAGTGA AGGTATAAAA AGGTTACGTG CTCAGCACAA ACTAACGCAA ACTAAGCTAG CTGATATGGC CGATATTCCA CGAGCAACAT TGGCTAATAT GGAAAGCGAA CAATCAAATC CAAGCATAAC TTTGGTTGTT AAAGTAGCAC AAGCATTAGG TGTGTCTGTT GATGATTTAA TAAGTCGGCA ATCAGCACAT GTTACCGAGG TTTGTCGTAA AGATATGCCC ATTACTCAAT TAGATGATGG TAGGTTTTCT AGTACTCGAA CAAGTCCTAT CAGCACGCAA AAACTACAAA TCAACGATAT TAGTATGAAG CCGAACTGTT ATAGCAAAGG GGTGCCGCAC CCAGAGGGTA GTCATGAGTT GTTTTTGTGT TTGGAAGGGA CTGCTTGTGT TGAAGTACAA GGAGTAGAGT ATATGGTGGA GGCTGGTAAC TTAATTTATT TCCATGGTCA TCTTCCTCAC TGTTATGGCA ATAAAAGCAC AAAACCTGTA AATGCTGTGG CAGTGGTCTT TATGGCTTAG
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Protein sequence | MSNPISEGIK RLRAQHKLTQ TKLADMADIP RATLANMESE QSNPSITLVV KVAQALGVSV DDLISRQSAH VTEVCRKDMP ITQLDDGRFS STRTSPISTQ KLQINDISMK PNCYSKGVPH PEGSHELFLC LEGTACVEVQ GVEYMVEAGN LIYFHGHLPH CYGNKSTKPV NAVAVVFMA
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