Gene CPS_3286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3286 
Symbol 
ID3520359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3412608 
End bp3413147 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content41% 
IMG OID637285735 
ProductDNA-binding protein 
Protein accessionYP_269962 
Protein GI71279897 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.414425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAACC CTATTAGTGA AGGTATAAAA AGGTTACGTG CTCAGCACAA ACTAACGCAA 
ACTAAGCTAG CTGATATGGC CGATATTCCA CGAGCAACAT TGGCTAATAT GGAAAGCGAA
CAATCAAATC CAAGCATAAC TTTGGTTGTT AAAGTAGCAC AAGCATTAGG TGTGTCTGTT
GATGATTTAA TAAGTCGGCA ATCAGCACAT GTTACCGAGG TTTGTCGTAA AGATATGCCC
ATTACTCAAT TAGATGATGG TAGGTTTTCT AGTACTCGAA CAAGTCCTAT CAGCACGCAA
AAACTACAAA TCAACGATAT TAGTATGAAG CCGAACTGTT ATAGCAAAGG GGTGCCGCAC
CCAGAGGGTA GTCATGAGTT GTTTTTGTGT TTGGAAGGGA CTGCTTGTGT TGAAGTACAA
GGAGTAGAGT ATATGGTGGA GGCTGGTAAC TTAATTTATT TCCATGGTCA TCTTCCTCAC
TGTTATGGCA ATAAAAGCAC AAAACCTGTA AATGCTGTGG CAGTGGTCTT TATGGCTTAG
 
Protein sequence
MSNPISEGIK RLRAQHKLTQ TKLADMADIP RATLANMESE QSNPSITLVV KVAQALGVSV 
DDLISRQSAH VTEVCRKDMP ITQLDDGRFS STRTSPISTQ KLQINDISMK PNCYSKGVPH
PEGSHELFLC LEGTACVEVQ GVEYMVEAGN LIYFHGHLPH CYGNKSTKPV NAVAVVFMA