Gene CPS_3190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3190 
Symbol 
ID3519650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3319983 
End bp3321434 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content38% 
IMG OID637285639 
Producthypothetical protein 
Protein accessionYP_269886 
Protein GI71278166 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.602192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACTG CCTTGTTATT TACATTAGGC ATCGCAGCCG CTACTAGCTT TAATGCAAGT 
GCTATTGATA ATCATAACAA TAAAAATAAG TTACCCGATA TAGGAATTTC TGGCTACAGC
GTATTATCTA CCGATAAAGA GCTGCAAATC GGTAAAGCAA TGATGCGGCA ATTACGCGCT
TCACAACCGC TAATTCAAGA CCCAGTTTTA ATTGAATATA TAAATCACTT AGGTAATAGC
CTAGTGAAAA ATGCTCAAGG GGTGAATTAT GCGTTTGAGT TTTTTCTTAT CAATAATAAC
GAATTAAACG CTTTTGCTTT TTTTGGCGGT CATGTAGGCA TCCATAGTGG TTTAATAACA
ACAGCTGATA CAGAAAGTGA ATTAGCTTCT GTTATTGCTC ATGAAATTTC TCACGTTACT
CAGCGCCATT TAGCCCGACG TCTTGAATCA CAAAGCCAAA CTCAAGGTTT AACCATGGCT
GCTATGCTGT CTAGTGTACT GATTACCTTG GTTAACCCTA CCGTTGGCAT CGCCGCACTA
AGCGCAAGTA TGGCCGTAAC GCAACAAGCC AGCATTAACT ACACTCGTGG TAATGAAAAA
GAAGCAGACC GAGTAGGTAT TGCTTTACTA GCGAGCAGCA ATTATGACCC TCAAGGTGCT
GCAAGCTTTT TTAGTAAAAT GTCAACTAAG TACCGCTATG CCAGCAAACC ACCGGCAATG
TTGCTTACTC ATCCATTACC TGAATCGCGT ATAGCTGATG CTCGCCAGCG TGCATTAAAC
TACCCAGCAA GACCTTTACC ACCTAGTTTA GGTTTTGAAT TAACCAAAGC AAGATTAAAG
TCTAGATATC AAGGCGAGGC AAAATCCAAT ATTAGTTTCT TTAAACTACA GTTGGAGAAA
AAACGCTACG CTATCAAAGC TGCTGCACAA TATGGTTTAG CACTATCATA TTTTGAAAAC
AAACAAACTA GTGAAGCTTT GCAGTTATTA GAGATGTTAG AAAAAAATGA TAAGGATAAT
TTATTTTATG TTGATGCCTT AACGGATGTC TACATAGCAA ATAATCAGGC TAACAAAGCA
ATAAAGATGC TTGAACGATT AAACTTATTC ATGCCTAACA ATCAGGTAGT CAGTTTAAAC
TATGCTAACG CCCTACTCAG CGTGAAAGAA TATGATCTTG CAGCGCAAAT ATTACAGGAC
TTTTTATTAG TCAACCCAGG TAACTTTATC GCTTATGATA TATTAACTAC CTTGTATAGA
ACTCAAGAGA AAACAGGTTT AATGCACATG AGTAAAGCAG AAGTGTATGC TTTACTCGGC
GCATATCCAA AAGCCGTTGA TGAATTGCAG ACCAGTTATG CATTTCTTGA TGAGCAACCT
TTAATGCAAA AAAGAGTGAA GGCCCGGATA TTACAGTTAC AAGAACAAGA AAATCGTTTA
AAACGTTTAT AA
 
Protein sequence
MFTALLFTLG IAAATSFNAS AIDNHNNKNK LPDIGISGYS VLSTDKELQI GKAMMRQLRA 
SQPLIQDPVL IEYINHLGNS LVKNAQGVNY AFEFFLINNN ELNAFAFFGG HVGIHSGLIT
TADTESELAS VIAHEISHVT QRHLARRLES QSQTQGLTMA AMLSSVLITL VNPTVGIAAL
SASMAVTQQA SINYTRGNEK EADRVGIALL ASSNYDPQGA ASFFSKMSTK YRYASKPPAM
LLTHPLPESR IADARQRALN YPARPLPPSL GFELTKARLK SRYQGEAKSN ISFFKLQLEK
KRYAIKAAAQ YGLALSYFEN KQTSEALQLL EMLEKNDKDN LFYVDALTDV YIANNQANKA
IKMLERLNLF MPNNQVVSLN YANALLSVKE YDLAAQILQD FLLVNPGNFI AYDILTTLYR
TQEKTGLMHM SKAEVYALLG AYPKAVDELQ TSYAFLDEQP LMQKRVKARI LQLQEQENRL
KRL