Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3190 |
Symbol | |
ID | 3519650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3319983 |
End bp | 3321434 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637285639 |
Product | hypothetical protein |
Protein accession | YP_269886 |
Protein GI | 71278166 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.602192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTACTG CCTTGTTATT TACATTAGGC ATCGCAGCCG CTACTAGCTT TAATGCAAGT GCTATTGATA ATCATAACAA TAAAAATAAG TTACCCGATA TAGGAATTTC TGGCTACAGC GTATTATCTA CCGATAAAGA GCTGCAAATC GGTAAAGCAA TGATGCGGCA ATTACGCGCT TCACAACCGC TAATTCAAGA CCCAGTTTTA ATTGAATATA TAAATCACTT AGGTAATAGC CTAGTGAAAA ATGCTCAAGG GGTGAATTAT GCGTTTGAGT TTTTTCTTAT CAATAATAAC GAATTAAACG CTTTTGCTTT TTTTGGCGGT CATGTAGGCA TCCATAGTGG TTTAATAACA ACAGCTGATA CAGAAAGTGA ATTAGCTTCT GTTATTGCTC ATGAAATTTC TCACGTTACT CAGCGCCATT TAGCCCGACG TCTTGAATCA CAAAGCCAAA CTCAAGGTTT AACCATGGCT GCTATGCTGT CTAGTGTACT GATTACCTTG GTTAACCCTA CCGTTGGCAT CGCCGCACTA AGCGCAAGTA TGGCCGTAAC GCAACAAGCC AGCATTAACT ACACTCGTGG TAATGAAAAA GAAGCAGACC GAGTAGGTAT TGCTTTACTA GCGAGCAGCA ATTATGACCC TCAAGGTGCT GCAAGCTTTT TTAGTAAAAT GTCAACTAAG TACCGCTATG CCAGCAAACC ACCGGCAATG TTGCTTACTC ATCCATTACC TGAATCGCGT ATAGCTGATG CTCGCCAGCG TGCATTAAAC TACCCAGCAA GACCTTTACC ACCTAGTTTA GGTTTTGAAT TAACCAAAGC AAGATTAAAG TCTAGATATC AAGGCGAGGC AAAATCCAAT ATTAGTTTCT TTAAACTACA GTTGGAGAAA AAACGCTACG CTATCAAAGC TGCTGCACAA TATGGTTTAG CACTATCATA TTTTGAAAAC AAACAAACTA GTGAAGCTTT GCAGTTATTA GAGATGTTAG AAAAAAATGA TAAGGATAAT TTATTTTATG TTGATGCCTT AACGGATGTC TACATAGCAA ATAATCAGGC TAACAAAGCA ATAAAGATGC TTGAACGATT AAACTTATTC ATGCCTAACA ATCAGGTAGT CAGTTTAAAC TATGCTAACG CCCTACTCAG CGTGAAAGAA TATGATCTTG CAGCGCAAAT ATTACAGGAC TTTTTATTAG TCAACCCAGG TAACTTTATC GCTTATGATA TATTAACTAC CTTGTATAGA ACTCAAGAGA AAACAGGTTT AATGCACATG AGTAAAGCAG AAGTGTATGC TTTACTCGGC GCATATCCAA AAGCCGTTGA TGAATTGCAG ACCAGTTATG CATTTCTTGA TGAGCAACCT TTAATGCAAA AAAGAGTGAA GGCCCGGATA TTACAGTTAC AAGAACAAGA AAATCGTTTA AAACGTTTAT AA
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Protein sequence | MFTALLFTLG IAAATSFNAS AIDNHNNKNK LPDIGISGYS VLSTDKELQI GKAMMRQLRA SQPLIQDPVL IEYINHLGNS LVKNAQGVNY AFEFFLINNN ELNAFAFFGG HVGIHSGLIT TADTESELAS VIAHEISHVT QRHLARRLES QSQTQGLTMA AMLSSVLITL VNPTVGIAAL SASMAVTQQA SINYTRGNEK EADRVGIALL ASSNYDPQGA ASFFSKMSTK YRYASKPPAM LLTHPLPESR IADARQRALN YPARPLPPSL GFELTKARLK SRYQGEAKSN ISFFKLQLEK KRYAIKAAAQ YGLALSYFEN KQTSEALQLL EMLEKNDKDN LFYVDALTDV YIANNQANKA IKMLERLNLF MPNNQVVSLN YANALLSVKE YDLAAQILQD FLLVNPGNFI AYDILTTLYR TQEKTGLMHM SKAEVYALLG AYPKAVDELQ TSYAFLDEQP LMQKRVKARI LQLQEQENRL KRL
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