Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3173 |
Symbol | xth |
ID | 3520254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3305759 |
End bp | 3306565 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637285622 |
Product | exonuclease III |
Protein accession | YP_269869 |
Protein GI | 71279793 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCA TCTCTTTTAA TATTAACGGC CTTCGTGCTC GTCTTCACCA ATTACAAGCG ATTATCGATA AACATCAGCC CGATATCATT GGTTTACAAG AAATCAAAGT TCATGATGAA GCTTTCCCAT TAGAAGCTGT TGAAGCCATG GGTTATCACG TATATTTTCA TGGCCAAAAA GCCCATTATG GCGTTGCCAT GTTATGCAAA AAAGAAGCTG AGTCAGTACA ACGGGGATTT CCTACAGACG ATGATGAAGC CCAACGTAGA ATGATTATGG TCACAACAAC TAATGATAAA GGTGAGAAAG TAACCGTATT AAATGGCTAT TTTCCTCAAG GCGAGAATAT TAGTCATGAG ACTAAATATC CTTATAAGAG AAAATTCTAT AAAGATTTAA TGACCTACCT TAATGACAAT CACGTCAATG ACGAAAATGT GGTTGTAATG GGTGACATTA ATATTTCTCC GCAAGACTTA GATATTGGTA TTGGTGACGT AAACAGTAAA CGCTGGTTAA AAAGCGGTAA ATGTTCTTTC CAACCTGAAG AAAGAGAATG GTTAACAAGG TTAATGGATT GGGGTTTTGT TGACACCTTC CGTCAATTAC ATCCCGACAC TACCGAGCGT TACTCTTGGT TTGATTATCG CTCGCGTGGC TTTGATGACA ACCGCGGTCT TCGTATTGAT GTGGTACTAG CGACCAAAAA TATGGCTGAG CAATGTATTG AAGCCGATAT AGATTATGAA TTACGCGCTA TTGAAAAGCC TTCAGATCAT GCGCCAATTT GGTCAACATT TTCATAA
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Protein sequence | MKIISFNING LRARLHQLQA IIDKHQPDII GLQEIKVHDE AFPLEAVEAM GYHVYFHGQK AHYGVAMLCK KEAESVQRGF PTDDDEAQRR MIMVTTTNDK GEKVTVLNGY FPQGENISHE TKYPYKRKFY KDLMTYLNDN HVNDENVVVM GDINISPQDL DIGIGDVNSK RWLKSGKCSF QPEEREWLTR LMDWGFVDTF RQLHPDTTER YSWFDYRSRG FDDNRGLRID VVLATKNMAE QCIEADIDYE LRAIEKPSDH APIWSTFS
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