Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3157 |
Symbol | fadI |
ID | 3520938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3287920 |
End bp | 3289227 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637285607 |
Product | 3-ketoacyl-CoA thiolase |
Protein accession | YP_269854 |
Protein GI | 71280472 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02446] fatty oxidation complex, beta subunit FadI |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATAA AAAGACTAAC AACTTCGACG GGTGAGCGCA TAGCAATTGT TGCTGGCTTG CGTACTCCGT TTGCTAAACA GGCAACGGCT TTTCATGGTG TACCAGCAGT TGATTTGGGC AAAATCGTTG TTAATGAATT ATTACAAAAA CACGATGTTG ACCCAGGGAT CATTGATCAA CTTGTTTTTG GTCAAGTAGT TCAAATGCCG GAAGCGCCAA ACATTGCTCG TGAAATCGTC TTGGGTACCG GTATGAATAC TCGTACTGAT GCTTACAGTG TCTCGCGCGC CTGTGCTACT AGTTTTCAAT CAACGGTTAA CGTTGCTGAA TCTATTATGG CTGGGCACGT TGATGTTGGT ATTGCTGGCG GTGCTGATTC ATCATCAGTG GCACCTATAG GTGTTTCTAA AAAGCTTGCA CGCACGTTAG TTGATTTAAC CAAAGCAAGA TCACTAGGGC AGAGACTTTC ACTACTTAGT CGTCTTGGTT TGAAAGATTT ATTACCCGTT TCTCCAGCTG TCGCTGAATA CTCTACCGGT ATTTCTATGG GACAAACGGC AGAGCAAATG GCGAAAACTT ATCAAATTTC TCGTCAAGAT CAAGATGCAT TAGCCCACAG ATCGCACACT TTAGCGACCA AGAGTTGGCA AGAAGGTAAA TTAGCAGGTG AGGTCATGAC AGTTCATGCG GAACCTTATA AAAGCTTTAT CGATAGAGAT AATTGTTTTC GAGAAAATTC TGTTTTAGAA AGTTATGCTA AATTAAAACC AGTTTTTGAT CGCAAGCATG GCACAGTTAC CGCTGCTACA AGTACGCCGT TGACCGATGG TGGTGCAGCT ATCCTACTAA TGCGTGAAGG ACGAGCGAAA GAGCTAGGTT ATAAACCATT AGGCTATATT CGTAGTTTTG GTTTTGCTGC CATCGATGTT TGGCAAGACA TGCTCATGGG TCCAAGTTAT GCCACACCTA TTGCATTACA ACGTGCGGGC ATGAATTTAG CTGATTTAGA TTTGATTGAA ATGCATGAAG CATTTGCAGC CCAAGCATTA GCGAACATGA AAATGTTCGG TAGTACTAAG TTTGCTCAAG AGCAACTTGG CAGAGATAAA GCTATTGGTG ACATTGATAT GGATAAATTT AATGTTATGG GTGGCTCGCT CGCCTATGGA CACCCTTTTG CTGCTACGGG TGCAAGACTT ATCACACAAA CCCTTAATGA ATTAAACCGT CGTGGTGGTG GTGTTGGTTT AACAACAGCT TGTGCTGCAG GTGGTTTAGG CGCGGCAATG ATTGTGGAGA CAGACTAA
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Protein sequence | MTIKRLTTST GERIAIVAGL RTPFAKQATA FHGVPAVDLG KIVVNELLQK HDVDPGIIDQ LVFGQVVQMP EAPNIAREIV LGTGMNTRTD AYSVSRACAT SFQSTVNVAE SIMAGHVDVG IAGGADSSSV APIGVSKKLA RTLVDLTKAR SLGQRLSLLS RLGLKDLLPV SPAVAEYSTG ISMGQTAEQM AKTYQISRQD QDALAHRSHT LATKSWQEGK LAGEVMTVHA EPYKSFIDRD NCFRENSVLE SYAKLKPVFD RKHGTVTAAT STPLTDGGAA ILLMREGRAK ELGYKPLGYI RSFGFAAIDV WQDMLMGPSY ATPIALQRAG MNLADLDLIE MHEAFAAQAL ANMKMFGSTK FAQEQLGRDK AIGDIDMDKF NVMGGSLAYG HPFAATGARL ITQTLNELNR RGGGVGLTTA CAAGGLGAAM IVETD
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