Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3156 |
Symbol | fadJ |
ID | 3520456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3285557 |
End bp | 3287851 |
Gene Length | 2295 bp |
Protein Length | 764 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637285606 |
Product | multifunctional fatty acid oxidation complex subunit alpha |
Protein accession | YP_269853 |
Protein GI | 161407971 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0879697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATAATG AAGTAAATAG CACTGCTGAA AATAGTATTA CCAAGGCTTA TGGTAACGAT GCTGCTGAAG CAAAAGTCAC TGACGAAAAA GTAAGTGAGC ATAATGACCC AGTAGAGCCA ACAGGCAGTG CTTTTACTAT AGTTCGCCAT GATAATGGTA TCGCTCATTT AGTGATTGAT GTTATTGGTG AAAATGTAAA TACTCTTAAA GCAGAGTTTA CTGAGCAAGT TAATGCGGTA TTGGCTGAAA TTAAAGTTGA TAAAGCAATT ACCGGCATAG TGCTGTGTAG TGGTAAAAAA GGCTCTTTTG TAGCCGGTGC TGACATTAAT ATGCTCGATG CTTGTCAAAG CCGCGATGAA GTTGTTGCTT TATCTCGACA AGGACAACGA ATATTTTCTT TGCTAGAGCA ATTACCTATT CCTATTGTTG CGGCTATCGA TGGTGCATGT TTAGGTGGCG GTTTAGAGCT TGCTATGGCA TGTCATGCTC GAGTTTGTAG TGATAATAGT AAAACTGCTT TGGGTTTACC TGAGGTGCAA TTAGGCTTAT TGCCAGGTAG TGGCGGTACT CAGCGTTTAC CTCAGTTAGT CGGTTTACAA AAAGCCTTAG ACATGATGCT TACGGGCAAG CAATTACGCG CTAAACAAGC ATTAAAATCA GGTTTAGTTG ATGATGTTGT GCCAAGCAGT GTGTTGCTTA CGGTTGCTGA AGATTTAGCA ATATCTTTGC GTCAACGTGG CAAAAAGACA GTTAAGCGTA AACAAGGCTT GATGGATAAG TTGTTAGAAA ATAATGCTGT TGGTCGAAAA GTTGTTTATC AACAAGCGCA AAAAACTGTG CTAGCAAAAA CCCAAGGTAA TTATCCAGCG CCAGCTAAAA TTATTGATTG CATTCGCACT GGTATCGAAT CTTCACCTGA AAAGGGCTAT AGAGTAGAAG CTGAGCATTT TGCCGATCTG GTGATGAGTG ATGAATCTGC GCAACTACGT CAGTTATTCT TTGCGACAAC AGCAATGAAG AAAGAGCAGG GCGTTGCTGA TGTTATGCCA GAAAAAATGA CTAAAGCGGG TGTTTTAGGT GGCGGTTTAA TGGGTGGCGG TATTGCCTTT GTCACTGCAA CTAAAGCGAA TATGCCTGTA CGTGTTAAGG ATATTAGCCA CAAAGGTATT GGCCAAGCAT TAAAATACAG CTATCAAATA CTGAATAAAA AAGTTAAGCG TCGTTTTTTA CTTAACAGCG AAATGCAAAA ACAGTTAGCT ATGATAACCG GTAGTGTGGA ATATACGGGT TTTAAAGCCC TTGATATTGT TGTTGAAGCA GTATTTGAAG ATTTAACATT GAAACAAAAC ATGGTGGCTG AGGTTGAAGC GCAAGGGCAT GATAAAACTA TTTTTGCCAG CAATACCTCT AGTTTACCAA TAGGGAAGAT TGCTACTAAC GCAAAACGAC CTGAAAATGT AATTGGGCTA CATTATTTTT CGCCGGTTGA TAAAATGCCG TTAGTGGAAA TAATTCCTCA CGATAAAACC TCTGATCAAA CTATTTCAAA TACAGTGGCT TTTGCTAAAA AACAGGGTAA AACTCCTATT GTTGTTAAAG ACAAAGCAGG TTTTTATGTC AATCGTATTT TAGCACCTTA TATGAATGAA GCCGCTATTC TGCTTCTTGC TGGTGAGCCC ATTGATAAAA TAGACAAAGC ACTGGTAAAA TTTGGTTTTC CTGTAGGACC GATGCAACTG CTTGATGAAG TGGGAGTTGA CGTTGGCGCT AAAATTGGAC CCATCTTGCA GGCAGATCTT GGTGAGCGTT TTGCAGCACC AGCGGCGTTT GATAAATTAC TCGCAGATGG TCGTTTAGGT AAAAAAGTAA AGAAGGGTTT TTATCAGTAC GAAAAGCCAA CTTTTACTAA GAATTTACAA AATACTTTCA AAGGTATTAA ATCAGGCCAC AAACAAGTAG ATGAGACTAT CTATAGCTTA CTAAATATTA AGCCTATGGG AAGTCTATCA GCAGTAGAAA TTAGTAAACG TTGTACTTAC ATGATGCTAA ATGAAGCGGC ACGCTGTGTT GATGAAGGTA TAGTGAGAAA TGCTAGAGAT GGTGATATTG GTGCGATCTT CGGTATTGGA TTTCCACCCT TTTTAGGTGG ACCGCTACGT TATATTGATA AAATTGGTGC TAAGTCAGTG GTTGCTCAAT TAAGTCAATG GGCTGAGCAG CATGGCGAGC GTTATACTCC ATGTGAAGCC TTGATTACTA TGGCAGAAAA TGATGCAGTT TATTACCCAA AATAA
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Protein sequence | MNNEVNSTAE NSITKAYGND AAEAKVTDEK VSEHNDPVEP TGSAFTIVRH DNGIAHLVID VIGENVNTLK AEFTEQVNAV LAEIKVDKAI TGIVLCSGKK GSFVAGADIN MLDACQSRDE VVALSRQGQR IFSLLEQLPI PIVAAIDGAC LGGGLELAMA CHARVCSDNS KTALGLPEVQ LGLLPGSGGT QRLPQLVGLQ KALDMMLTGK QLRAKQALKS GLVDDVVPSS VLLTVAEDLA ISLRQRGKKT VKRKQGLMDK LLENNAVGRK VVYQQAQKTV LAKTQGNYPA PAKIIDCIRT GIESSPEKGY RVEAEHFADL VMSDESAQLR QLFFATTAMK KEQGVADVMP EKMTKAGVLG GGLMGGGIAF VTATKANMPV RVKDISHKGI GQALKYSYQI LNKKVKRRFL LNSEMQKQLA MITGSVEYTG FKALDIVVEA VFEDLTLKQN MVAEVEAQGH DKTIFASNTS SLPIGKIATN AKRPENVIGL HYFSPVDKMP LVEIIPHDKT SDQTISNTVA FAKKQGKTPI VVKDKAGFYV NRILAPYMNE AAILLLAGEP IDKIDKALVK FGFPVGPMQL LDEVGVDVGA KIGPILQADL GERFAAPAAF DKLLADGRLG KKVKKGFYQY EKPTFTKNLQ NTFKGIKSGH KQVDETIYSL LNIKPMGSLS AVEISKRCTY MMLNEAARCV DEGIVRNARD GDIGAIFGIG FPPFLGGPLR YIDKIGAKSV VAQLSQWAEQ HGERYTPCEA LITMAENDAV YYPK
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