Gene CPS_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3139 
Symbol 
ID3519648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3271607 
End bp3272005 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content36% 
IMG OID637285589 
Productputative 4-carboxymuconolactone decarboxylase 
Protein accessionYP_269836 
Protein GI71278164 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.287088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATC AACGATATAT ATCAGGTCTT GATAAGTTAA GAGAAATTGA TGGAGAAGCA 
GGTCAAAAAG TCATTGATAG TTTGGCATCA ATTTCACCAG ATTTAGCAAA ATATACGATA
GAATTTCCTT TTGGTGATAT TTACCAAAGG CCAGGGCTTG ATTTACAAAG TAGAGAGTTA
GCAACAGTTG CCGCCTTAAC TACTTTAGGA CATTGCCAGC CTCAACTGAA TGTACACATT
AACGGTGCTT TGAATGTAGG CTGCAAACCA GAACAGATAA TTGAAGTTAT TATACAAATG
TCAGTTTACG CTGGTTTCCC AGCAGCTTTA AATGGCATGT TGGTAGCAAA AGAAGTCTTT
ACGGAAAGAG GCATAATTGA CACAATAAAA AGCGATTAA
 
Protein sequence
MNNQRYISGL DKLREIDGEA GQKVIDSLAS ISPDLAKYTI EFPFGDIYQR PGLDLQSREL 
ATVAALTTLG HCQPQLNVHI NGALNVGCKP EQIIEVIIQM SVYAGFPAAL NGMLVAKEVF
TERGIIDTIK SD