| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3099 |
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| Symbol | pfaD |
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| ID | 3521854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3229398 |
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| End bp | 3230996 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637285550 |
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| Product | polyunsaturated fatty acid synthase PfaD |
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| Protein accession | YP_269797 |
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| Protein GI | 71281382 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATT TAAGTTATAG CAATGCCAAT CCAATTGATT GGGCATGGAA AGTTGATAGC
AGCGCTGTTA AAGCCAATGA TGTAGAAATA AAGTCAGCGT TAATGGATTT AACAAAGCCG
GTTTATGTCG CAAAATCTGC TAATAGTTTT GGTGTAGTAA ACGCTACTGC AGCTACCGGT
GATACGGATG TTGTCGCTTT TGCTCAAAAG CTAACTCCGC AAGATTTAGG TGATGATGCT
TATAAAAAGC AGCATGGCGT TAAATACGCT TATCATGGCG GCGCTATGGC TAATGGCATT
GCCTCAGTTG AGCTCGTTGT CGCTTTAGGC AAAGCCGGTT TTTTATGTTC ATTCGGCGCT
GCTGGATTAG TACCAGATGC TGTTGAAGAT GCGATTAAAC GTATCCAAGC AGAATTACCT
AATGGTCCTT ATGCGGTAAA TTTAATACAT GCACCAGCGG AAGAAGCATT AGAGCGTGGC
GCTGTTGAAC GCTTTTTAAA GCTTGGCGTT AAAACAGTAG AAGCTTCAGC TTATTTAGGG
TTAACCGAAC ATATCGTTTG GTATCGTTTA GCGGGTTTAT CTAAAAATAG CGATGGCAGC
GTAAAGATCG GCAATAAAGT TATTGCAAAG GTATCGCGAA CTGAAGTTGG TCGTCGCTTT
ATGGAGCCTG CGCCACAAAA ACTAATTGAT AAGCTACTGG CTCAAGGTAA AGTCACCCAA
GAGCAAGCTG AGCTTTCAAA GCTTGTACCT ATGGCTGATG ATATAACCGC TGAAGCAGAC
TCTGGTGGCC ATACCGATAA TCGACCTTTC TTAACCTTAT TGCCGACGAT TATAGCGCTT
CGTGATGAAG TTCAAGCACA GTACAACTTC TCTCCAGCGC TACGTGTTGG TGCTGGTGGT
GGTATTGGTA CCCCTGAAGC TGCATTAGCT GCCTTTAATA TGGGCTCAGC TTATATTGTT
TTAGGCTCGG TAAACCAAGC ATGTGTTGAA GCTGGCGCTT CTGAATACAC TCGTAAGTTA
CTGGCTCAGG TTGAAATGGC CGATGTTACT ATGGCACCAG CGGCAGATAT GTTTGAAATG
GGCGTGAAGT TGCAAGTTGT TAAGCGTGGT TCAATGTTCG CTATGCGCGC GAAGAAACTT
TACGAGCTGT ACATTAACTA TGACTCAATT GAAGCTATTC CAGCCGACGA ACGTCTTAAG
ATTGAAAAGC AGATATTTCG CTCTAATCTT GATGATGTTT GGGCAGGTAC TGAAGCCTTT
TTCACTGAAC GTGATCCTGA AATGTTGGCG CGAGCACAAT CTAGCCCTAA ACGTAAAATG
GCGCTAATTT TCCGTTGGTA TTTAGGATTA AGCTCTCGCT GGTCAAATAC CGGCGAGAAA
GGCCGTGAAA TGGATTATCA AATTTGGGCA GGCCCAAGTC TTGGCGCATT TAACAGCTGG
GTAAAAGGCA CTTACTTAGA AGATTATACT CGCCGTGGCG CCGTAGACGT TGCTTTGCAT
ATGTTAAAAG GTGCAGCCTA CTTACAACGA GTTAATCAGC TAAAACTACA AGGTGTTAGC
TTAAGCACTG AACTGGCTGG CTATCGTAGC GAAGATTAG
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| Protein sequence | MSNLSYSNAN PIDWAWKVDS SAVKANDVEI KSALMDLTKP VYVAKSANSF GVVNATAATG
DTDVVAFAQK LTPQDLGDDA YKKQHGVKYA YHGGAMANGI ASVELVVALG KAGFLCSFGA
AGLVPDAVED AIKRIQAELP NGPYAVNLIH APAEEALERG AVERFLKLGV KTVEASAYLG
LTEHIVWYRL AGLSKNSDGS VKIGNKVIAK VSRTEVGRRF MEPAPQKLID KLLAQGKVTQ
EQAELSKLVP MADDITAEAD SGGHTDNRPF LTLLPTIIAL RDEVQAQYNF SPALRVGAGG
GIGTPEAALA AFNMGSAYIV LGSVNQACVE AGASEYTRKL LAQVEMADVT MAPAADMFEM
GVKLQVVKRG SMFAMRAKKL YELYINYDSI EAIPADERLK IEKQIFRSNL DDVWAGTEAF
FTERDPEMLA RAQSSPKRKM ALIFRWYLGL SSRWSNTGEK GREMDYQIWA GPSLGAFNSW
VKGTYLEDYT RRGAVDVALH MLKGAAYLQR VNQLKLQGVS LSTELAGYRS ED
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