| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3011 |
|---|
| Symbol | ppsA |
|---|
| ID | 3522155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3152125 |
|---|
| End bp | 3154512 |
|---|
| Gene Length | 2388 bp |
|---|
| Protein Length | 795 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637285463 |
|---|
| Product | phosphoenolpyruvate synthase |
|---|
| Protein accession | YP_269710 |
|---|
| Protein GI | 71281683 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGAAA ATGTTCTTTG GTATCAAAGC TTAGGCATGA ACGATGTAGA CCGCGTAGGT
GGTAAAAATG CATCGCTTGG TGAAATGATT TCGAACTTAG CTAATGTTGG CGTGCAAGTC
CCTACTGGGT TTGCGACTAC GTCATTTGCA TTTAATGAAT TTTTAGAACA AAGCGGTATT
AATGAAAAAA TTTACCAACT CCTTGATGAT TTAGATGTAG ACGATATTAG TGCGCTTGGC
AAATGTGGTG CTATTATTCG TCAATGGATT ATTGATACGC CATTTCTTCC TCAAATGCAG
ACTGATATTG AAGCGGCTTA CGCACAACTT GCCGGTGACT TCTCAGACGA TGCTTCTTTT
GCGGTACGTT CTTCTGCCAC AGCAGAAGAT ATGCCAGATG CTTCTTTTGC CGGCCAACAA
GAAACCTTTT TAAATGTTCG TGGTTTTGAT TCAGTGATGG TTGCTATTAA GCATGTATTT
GCTTCATTGT TTAATGACCG TGCTATTTCA TACCGTGTTC ATCAAGGCTA TGACCATCGC
GGTGTTGCGT TATCTGCTGG TATTCAGCAA ATGGTGCGTA GTGATATTTC GGCTTCAGGT
GTTATGTTCT CTATTGATAC TGAATCTGGT TTTGACCAAG TTGTTTTCAT CACCTCAAGT
TTTGGCTTAG GTGAAATGGT GGTGCAGGGC GCGGTAAACC CTGATGAGTT TTATGTTCAT
AAACCAACAT TGGCTAAAGG AAAACCTGCA GTAGTACGTC GTAATATTGG TAGCAAAGCT
ATTAAAATGG TGTACTCAGA TAGCCAAGAA CATTCTAAGC AAGTTGAAAT TGTTGATATT
GATGAAGCTG ACTCTAACCG TTTTTCATTA ACCGATGCTG AAGTTGAAGA ACTAGCTAAA
CAAGCAGTAA TTATTGAAAA CCATTACGGC CATCCAATGG ATATTGAATG GGCCAAAGAT
GGCTTAGATG GCAAGCTATA TATTGTTCAA GCACGTCCTG AAACGGTGAG AAGTCGTGAA
AATGCCAATG TAATGGAACA GTTCCAATTA AAAGCTGATA ACAACTTAGA AGTGGTTTGT
GAAGGACGTT CAATTGGTCA TAAAATTGGT AGCGGTGAAG CGAAAGTTTT ATCGTCACTG
GCTGAAATGG ACAAAATCCT ACCGGGTGAT GTATTAGTTA CTGATATGAC TGACCCTGAT
TGGGAGCCTA TCATGAAACG CGCCTCAGCG ATTGTGACTA ATCGCGGCGG AAGAACTTGT
CATGCTGCTA TCATTGCACG TGAAATGGGT ATTCCTGCGG TTGTTGGTTG TGGTAATGCG
ACTGAGCTTA TTAAAGCCGG CGATAACATA ACAGTTTCGT GTGCTGAAGG TGATACCGGT
TTTATTTACC GTGGCAAACT AGATTACGAT GTGAAAACGT CTGAAATTAA TGATATGCCA
GAGTTACCAC TTAAAATCAT GATGAATGTT GGTAACCCAG ACAGAGCTTT TGCTTTTGCC
CGTTTACCTC ATGCTGGTAT TGGTTTAGCG CGCTTAGAAT TTATTATCAA TAAAATGATT
GGTATTCACC CTAAAGCACT GCTTAATTTC GATACTCAGC CTGCTGAATT ACAAGATGAA
ATTAATGATA TTATCGTGGG TTACGAAAGC CCTGTTGAGT TTTATATTGC TAAGCTAACT
GAAGGTATTT CTACGTTAGC AGCAGCATAC TCACCAGAGA AAGTGATTGT GCGTATGTCT
GATTTCAAAT CAAATGAGTA CGCTAACCTT GTTGGCGGCG AAGCGTTTGA ACCACATGAA
GAAAATCCTA TGATTGGTTA TCGTGGTGCT GCGCGTTATA TCTCTAAAGA TTTTAGAGAT
TGTTTTGCCC TTGAATGTGA AGCGATAAAA CGTGTTCGTA ACGACATGGA TTTAACGAAT
GTTGAAGTAA TGATCCCGTT TGTTCGTACG TTAGGTGAAG CCGCAGCCGT TATTGATATT
TTAGCTGAGC ATGGTTTAAA ACGTGGCGAG AATGGTTTAC GCATTATTAT GATGTGTGAA
TTACCATCAA ACGCGCTATT AGCTGATCAG TTCCTTGATT ATTTTGATGG ATTCTCTATT
GGTTCAAACG ATTTAACTCA GCTAACGCTT GGTTTAGATA GAGACTCAGG TTTAATCGCG
CATTTATTTG ATGAGCGTGA CCCAGCGATA AAAATATTAC TAGCGATGGC GATAAAAGCC
TGTAAAGCAC GTGGTAAATA CGTTGGTATT TGTGGTCAAG GACCTTCAGA TCATGAAGAC
TTTGCTGCTT GGTTAGTAGA GCAGGGCATT GATAGTGTCT CGTTAAACCC AGATACCGTA
TTACCAACAT GGTTATACCT TGCAGAGCAG TTAGCGAAAA AAAGCTAA
|
|---|
| Protein sequence | MQENVLWYQS LGMNDVDRVG GKNASLGEMI SNLANVGVQV PTGFATTSFA FNEFLEQSGI
NEKIYQLLDD LDVDDISALG KCGAIIRQWI IDTPFLPQMQ TDIEAAYAQL AGDFSDDASF
AVRSSATAED MPDASFAGQQ ETFLNVRGFD SVMVAIKHVF ASLFNDRAIS YRVHQGYDHR
GVALSAGIQQ MVRSDISASG VMFSIDTESG FDQVVFITSS FGLGEMVVQG AVNPDEFYVH
KPTLAKGKPA VVRRNIGSKA IKMVYSDSQE HSKQVEIVDI DEADSNRFSL TDAEVEELAK
QAVIIENHYG HPMDIEWAKD GLDGKLYIVQ ARPETVRSRE NANVMEQFQL KADNNLEVVC
EGRSIGHKIG SGEAKVLSSL AEMDKILPGD VLVTDMTDPD WEPIMKRASA IVTNRGGRTC
HAAIIAREMG IPAVVGCGNA TELIKAGDNI TVSCAEGDTG FIYRGKLDYD VKTSEINDMP
ELPLKIMMNV GNPDRAFAFA RLPHAGIGLA RLEFIINKMI GIHPKALLNF DTQPAELQDE
INDIIVGYES PVEFYIAKLT EGISTLAAAY SPEKVIVRMS DFKSNEYANL VGGEAFEPHE
ENPMIGYRGA ARYISKDFRD CFALECEAIK RVRNDMDLTN VEVMIPFVRT LGEAAAVIDI
LAEHGLKRGE NGLRIIMMCE LPSNALLADQ FLDYFDGFSI GSNDLTQLTL GLDRDSGLIA
HLFDERDPAI KILLAMAIKA CKARGKYVGI CGQGPSDHED FAAWLVEQGI DSVSLNPDTV
LPTWLYLAEQ LAKKS
|
|---|
| |