| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2986 |
|---|
| Symbol | |
|---|
| ID | 3522208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 3127769 |
|---|
| End bp | 3128653 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637285439 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_269686 |
|---|
| Protein GI | 71281736 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0027982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAT TTTATATATT TTCATCGCCT TCACTACGCG CTATTTTACA GTTCTCCATC
ATTACTAGCT TATTATTTGT AAGCCTAGTA GGTCATGTAA AATCCGTAGA AGCGTTAATA
GAATCATCTG CTGATAAAGT TGAAAATAAA AATAAAAAAC AACGGGTATT TTCGTTACCT
AAACCAATGC TCGATGAGTT AATGAAAAAC ATGGTACTAG TTGAAGCAGG TAGCTTTGCG
ATGGGCTCTG ACTCACCTTT AGCGAGAAAC CGTGAAAAAC CTGTCAGGCA AGTCAGTCTT
GATGCTTTTT ACATTGGGAA ATATGAATTA ACTCAAGACC TGTTCGAGCA AATTATGGGG
TGGAACAATA GTTTCTTCGC CTGTGATAAG TGTCCGGTAA ATAACATAAG TTGGTTTAAT
ATGCTTTTAT TTATTGAGCG ATTAAATAGT GCTACTGGTA AAGAATTTAG TTTACCTACC
GAAGCTCAGT GGGCATATGC TGCAAAAGGT GGCAATAAGT CTCAAAACTA TCGATACAGT
GGTTCAAACA ATATTAACGA CGTTGCTTGG TTTGCTGATA ACGCAAAAAA TAAAAGCCAC
CCTGTTGGCC TCAAAAAGCC TAACGAACTT GGTTTATACG ATATGACGGG GAATTTATGG
GAATTTTGTC TTGATGACAT GAGCCGACAA GCTTATACCT TCACAGAGAG TCATAACCCT
TTTATGGGTG ATAAAGAAAA CCTTAAACAA AAAGCAATGA AAGTTATTCG CGGTGGCGGT
TATGAGTTTT CCGCAACAGA AAACTTAGTA TTCATGCGTG ATGGCGCTAC TAATAATGTA
CGTATGGCAG ACATCGGATT CAGATTAGTC ATGAGCAAAA ATTAA
|
|---|
| Protein sequence | MNKFYIFSSP SLRAILQFSI ITSLLFVSLV GHVKSVEALI ESSADKVENK NKKQRVFSLP
KPMLDELMKN MVLVEAGSFA MGSDSPLARN REKPVRQVSL DAFYIGKYEL TQDLFEQIMG
WNNSFFACDK CPVNNISWFN MLLFIERLNS ATGKEFSLPT EAQWAYAAKG GNKSQNYRYS
GSNNINDVAW FADNAKNKSH PVGLKKPNEL GLYDMTGNLW EFCLDDMSRQ AYTFTESHNP
FMGDKENLKQ KAMKVIRGGG YEFSATENLV FMRDGATNNV RMADIGFRLV MSKN
|
|---|
| |