Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2980 |
Symbol | |
ID | 3522699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3116997 |
End bp | 3118805 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637285433 |
Product | ABC transporter, ATP-binding/permease protein |
Protein accession | YP_269680 |
Protein GI | 71282226 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.53006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCGCT CTAGTTATCC CGACCAAGAA GTCAGTTCCA TCAACTGGCA AGCATTCAAA CTTATTTTAC CTTACCTATT CGAATATAAA AAACGTATTG CGTTTGCTAT GTCATGTTTA GTTTTTACTA AAATAGCCAG TGTTTACCTA CCTTTCATAT TAAAAGATAT CGTTGATACA TTAGACGCTA ATAGTACAGG TACTGATTCC GCTTTAATTA TTGTTCCTTT AGGTTTAGTG GCCGCTTATG GTTTAGTGCG GTTATCCATC GTAGTTTTTG CTGAAATCAG AGATACGCTA TTTGGCCGAG TTACTGAAAG AGCTATAAGG CGCATTGGTT TAAAAGTTTT TCGTCATTTG CATTCCCTTG ATTTAGATTT TCACCTGAAT AGACAAACGG GAGGATTATC TCGTGATATA GACCGAGGCA CTTCGGGCAT CAATTTTTTA ATGCGCTTTA TGGTCTTTAA CATTGTACCC ACCTTGCTTG AAATAGTGAT GGTGGTGACT ATTTTATTTG TGAAATACGG CATATGGTAT GCGGTTATAA CGCTTTCCTC AATTATTGCC TATATTGCTT ATTCAGTTTT TGCCACTGAG TTACGAACTC GCTATGTCCG TGCAGCCAAC ATAGCAGACT CATCAAGTAA TACTCGTGCT ATTGATAGTT TACTAAATTA CGAAACGGTG AAGTATTTCA CCAATGAAGA ATTTGAAGCG CAAGCTTATG ATCAACAGTT GTCAACGTGG GAACAGGCAA AAATTAAAAA CCGTTTATCT TTATTTGCTC TAAACGGTGG CCAAGCACTC ATTATAGCCG CAGCTATGAC TGCCATGCTG GCGCTTGCAG CTAGTGATGT TGCTGCAGAT GTTATGACCC TTGGAGACTT TGTTCTGATA AATGCCTTTA TGATGCAGTT ATTTATGCCA CTTAATTTTT TAGGCTTTGT TTATCGCGAG ATAAAGGGCT CGCTGGCAAA TATTGAAAAC TTATTTGGTT TATTAGCTAA AGCACCTAAG GTACAAGATG TTCCTGACGC TGCAATGTTA AATTTGGCAG AGCAGGGTGA TAGTTCGGTT ACTGAAGCGA GTATAGTTTT CAATAACATT GCCTTTGCCT ATAATGCCAA GCGACCTATC ATTAAAGGGA TTTCTTTTAA AGTTAATGCA GGTGAAAAAG TTGCTGTTGT TGGTCAAAGT GGCTCAGGTA AGTCAACCTT AGTAAAATTG TTATTTCGTT TTTACGATGT TGACTCTGGC AACATTCAGA TTAACGGGCA AGATATCAGT CAAGTGAGTC AACAATCACT ACGTAGCCAT ATTGGTATTG TACCGCAAGA TACTGTGCTT TTTAACGACA CTTTATTTAA TAATGTACAG TACGGTTGTC CAACAGCCAG CGAAGATGAA GTATTAAAAG CCATTGAACT AGCACATTTA TCTGAATTTA TTAGCAGTTT GCCTGATGGG TTAGAAACAG TAGTGGGAGA GCGAGGATTA AAACTATCAG GTGGTGAAAA ACAACGAGTT GCCATTGCCC GTACAATCTT AAAGAATCCA CAAGTCTTGG TGTTTGATGA GGCAACCTCC TCACTTGATA GTCATTCAGA ACAAGCTATC TTAACCGCAA TAAATGAAGT GACTAAAAGT AGAACCAGCC TTGTCATCGC ACATCGCCTA TCAACCATCA TTGATAGTGA CAATATTATT GTCATGAATC ATGGTGAAAT AGTTGAGCAG GGTAATCATC AACAATTACT CGAACTTGAA GGTCAATACA GTAAAATGTG GCAGCTACAG CAATCTTAG
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Protein sequence | MRRSSYPDQE VSSINWQAFK LILPYLFEYK KRIAFAMSCL VFTKIASVYL PFILKDIVDT LDANSTGTDS ALIIVPLGLV AAYGLVRLSI VVFAEIRDTL FGRVTERAIR RIGLKVFRHL HSLDLDFHLN RQTGGLSRDI DRGTSGINFL MRFMVFNIVP TLLEIVMVVT ILFVKYGIWY AVITLSSIIA YIAYSVFATE LRTRYVRAAN IADSSSNTRA IDSLLNYETV KYFTNEEFEA QAYDQQLSTW EQAKIKNRLS LFALNGGQAL IIAAAMTAML ALAASDVAAD VMTLGDFVLI NAFMMQLFMP LNFLGFVYRE IKGSLANIEN LFGLLAKAPK VQDVPDAAML NLAEQGDSSV TEASIVFNNI AFAYNAKRPI IKGISFKVNA GEKVAVVGQS GSGKSTLVKL LFRFYDVDSG NIQINGQDIS QVSQQSLRSH IGIVPQDTVL FNDTLFNNVQ YGCPTASEDE VLKAIELAHL SEFISSLPDG LETVVGERGL KLSGGEKQRV AIARTILKNP QVLVFDEATS SLDSHSEQAI LTAINEVTKS RTSLVIAHRL STIIDSDNII VMNHGEIVEQ GNHQQLLELE GQYSKMWQLQ QS
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