| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2975 |
|---|
| Symbol | |
|---|
| ID | 3522906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3113425 |
|---|
| End bp | 3114306 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637285428 |
|---|
| Product | putative bax protein |
|---|
| Protein accession | YP_269675 |
|---|
| Protein GI | 71282432 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2992] Uncharacterized FlgJ-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA TGTTATTCGT TCGTTTTATC GCATGTTTTT CGTTAGTCAT TGCGGTAGTC
GCGCCTTTTA CTTTTTTAGT GCCTAAACCT TTAATTACTA TCGTAGAGGT CGCTGTTGAA
CCTGTTACTG ATAAGGTTGT TGTTCAAGTT GTTGAAAAAG TAAAAGTAAT AGAGAAACCA
TTACATCAGG TAAATTTACC TGATTTTGCT GCTATTTATG ATATTCCAAC AAAAAAACGT
CAATTCTTTG GTTTTGTTCG TCCAGCAATA GAAGCAAAAA ATAATGAATT AGCTGAAGAT
AGATCGAAAC TTGAGCATTG GCATGAGCAG ATCTCACTTG GTTTAGGGCT TACTGTAGAA
GAACAGACGT CACTGCAAAC CCTTATCAAG GCTTATCGTA TTAATAAAGA AGCTTCAACT
TTACAGCAGA TTAATGATTT GTTGATACGT GTTGATATTA TCCCTACTTC ATTGGTATTG
GTTCAGGCTG CTAATGAGTC TGCTTGGGGA ACATCACGTT TTGCCCGTAT AGGTTTAAAC
TTCTTCGGTA TTTGGTGTTA TAGAACGGGC TGTGGCATGG TTCCAGGAGG GCGTAATACT
GGAGCCAAAC ATGAAGTAGC TGCATTTCAA AGTGTTGATG CTGCTGTTTC GGGCTATTTT
AATAATATAA ATAAGCATAA TGCTTATCAT GTGTTTAGAA CGATTCGTGC TGAATTAAGA
GCGCAAGACC AGGCGCTTGA TGCTGAAATT TTAGCAACAG GCTTGTTACC TTATTCTGAG
CGTGGTGTGC AGTACGTGTT AGATATAACT GACATGTTAA GACATAACCA ACGTTACTTT
GTTAAGCCTG CTAGTCAGCA ACAGACTGCG TCAGCAGATT AA
|
|---|
| Protein sequence | MKIMLFVRFI ACFSLVIAVV APFTFLVPKP LITIVEVAVE PVTDKVVVQV VEKVKVIEKP
LHQVNLPDFA AIYDIPTKKR QFFGFVRPAI EAKNNELAED RSKLEHWHEQ ISLGLGLTVE
EQTSLQTLIK AYRINKEAST LQQINDLLIR VDIIPTSLVL VQAANESAWG TSRFARIGLN
FFGIWCYRTG CGMVPGGRNT GAKHEVAAFQ SVDAAVSGYF NNINKHNAYH VFRTIRAELR
AQDQALDAEI LATGLLPYSE RGVQYVLDIT DMLRHNQRYF VKPASQQQTA SAD
|
|---|
| |