| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2902 |
|---|
| Symbol | purB |
|---|
| ID | 3520674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 3036062 |
|---|
| End bp | 3037432 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637285355 |
|---|
| Product | adenylosuccinate lyase |
|---|
| Protein accession | YP_269603 |
|---|
| Protein GI | 71280210 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0015] Adenylosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.451735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTT CAGCATTAAG TGCAATATCA CCTGTAGATG GTCGTTATGG TAGCAAGGTA
AAATCATTAC GCTCTATTTT TAGTGAATTT GGCCTAATTA AATACCGTGT TACTGTTGAA
GTACGTTGGT TACAAAAACT TGCAGCTACT AGCGCAATAG CAGAGGTTCC TGCATTTTCT
GAACAAGCAA ATGATGTATT AAATAATATT GTTGCTAACT TTAGTGAAGA AGATGCTTTA
ACGATCAAAA AAATTGAAGC GACAACTAAC CATGATGTAA AAGCAGTTGA ATACTTCTTA
AAAGATAAAA TTGCTGATAA CGCTGAATTA AACGCTGTGA CTGAATTCAT TCACTTTGCC
TGTACTTCAG AAGACATCAA CAACTTATCA CACGCATTAA TGTTAACTGA TTGTCGTGAA
AATGTATTAT TACCAGAAAT GGATAACATT TTAGCGGCGA TGAAAGCCTT AGCGATTGAA
TACAAAACGA TTCCAATGAT GTGTCGTACT CATGGCCAGC CAGCCTCACC TAGCACGTTA
GGAAAAGAGA TGGCTAACGT TTATGTGCGT CTACAACGTC AACGTGAGCA AATTGCTAAC
GTTGAAATGT TAGGTAAAAT TAACGGCGCT GTAGGTAACT ATAATGCTCA CCTTAGCGCT
TATCCTGAAG TTGATTGGCA TGAATACGCT AATGAGTTTG TTACTTCATT AGGTTTATCA
TTCAACGCAT TTACCACACA AATTGAACCG CATGACTATA TTGCTGAGTT ATTTGACGCA
ATCGCACGTT TTAATACCAT TTTAATCGAT TTTGATCGTG ATATTTGGGG TTATATTGCT
ATGGGTCATT TCAAGCAGAA AACTATCGCT GGTGAAATTG GTTCATCAAC TATGCCACAT
AAAGTTAACC CTATTGATTT CGAAAACTCA GAAGGTAACT TAGGCATTGC AAACGCATTA
TTCACTCACT TATCGCAGAA ATTGCCTATC TCTCGCTGGC AGCGTGACTT AACTGACTCA
ACAGTGCTAC GTAACTTAGG TGTTGGTTTT GCTCATACAA TGATTGCTTA TGGTGCTACA
TTAAAAGGCA TTAGTAAGTT AGAAGTAAAT GAAGCTAACT TAGCAGCTGA ATTAGACAGT
AATTGGGAAG TATTAGCAGA GCCAGTACAA ACGGTTATGC GTCGTTACGG TATTGAAAAA
CCTTATGAAA AACTAAAAGA ATTAACTCGT GGCAAACGTG TTAATGGCGA CTCTATGCGT
GCTTTTATCA TGACGCTTGA ATTACCTGAA CATGCTAAAG CTCAGTTATG TGAAATGACA
CCTGCTAGCT ACATTGGCCG TGCAGTTGCT TTCATTGATG AACTAAAATA A
|
|---|
| Protein sequence | MELSALSAIS PVDGRYGSKV KSLRSIFSEF GLIKYRVTVE VRWLQKLAAT SAIAEVPAFS
EQANDVLNNI VANFSEEDAL TIKKIEATTN HDVKAVEYFL KDKIADNAEL NAVTEFIHFA
CTSEDINNLS HALMLTDCRE NVLLPEMDNI LAAMKALAIE YKTIPMMCRT HGQPASPSTL
GKEMANVYVR LQRQREQIAN VEMLGKINGA VGNYNAHLSA YPEVDWHEYA NEFVTSLGLS
FNAFTTQIEP HDYIAELFDA IARFNTILID FDRDIWGYIA MGHFKQKTIA GEIGSSTMPH
KVNPIDFENS EGNLGIANAL FTHLSQKLPI SRWQRDLTDS TVLRNLGVGF AHTMIAYGAT
LKGISKLEVN EANLAAELDS NWEVLAEPVQ TVMRRYGIEK PYEKLKELTR GKRVNGDSMR
AFIMTLELPE HAKAQLCEMT PASYIGRAVA FIDELK
|
|---|
| |