Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2861 |
Symbol | |
ID | 3521935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2989286 |
End bp | 2989912 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637285314 |
Product | hypothetical protein |
Protein accession | YP_269566 |
Protein GI | 71281463 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.342932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTTAG GTTTTAATGC GTCAGAAATT ATCGAGTTTA CTAAGATATA CTTAGCTGTT TTCTATTCAA TCGTCGCAAC ATTTTATACT TTTAGATTGA TTAACAAGAA ACGACAGAAT GGTAAATCAT TGGTGTTTTC AGGAAAACCG TTTTGCAAGA CTTGGTGGAA CCATATTGCC TTTCGTTTTT TCCGTATCTC TATATGGATG GTATGTTTAT TTAGACTGTT TTACCCTAAT ATTGATAATT ATTTGGGTAT GATCAATATC CTGGAGTTAC CATCAGTTAT AACACTAGGG TTAATATTAT TAACGGTTGG CTTCCTCTCA ACTGCATTAA TTCATTATAG TTTAGGAAAA GAATGGCGTT CTGGTATTGA TCCTTCTGGA CCAGCCAGAG TTATTACAAG TGGGGCTTAT CAATTTTCAC GTAACCCAAT GTTTGTTTGT ATAGCAGTTG CGCAACTAGG TTTTTTCTTC GCTATGCCTT CTATTTTTTC ATTGGTATGT TTAACTATTG GTTTATACAC GCTAAACAGT CAGACCTTAG AAGAAGAGAT ACATTTATCT AAAAAATTTC CTATAGAGTA TGCTGCTTAT GCATCAAAGG TGCGACGTTG GGTATAA
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Protein sequence | MVLGFNASEI IEFTKIYLAV FYSIVATFYT FRLINKKRQN GKSLVFSGKP FCKTWWNHIA FRFFRISIWM VCLFRLFYPN IDNYLGMINI LELPSVITLG LILLTVGFLS TALIHYSLGK EWRSGIDPSG PARVITSGAY QFSRNPMFVC IAVAQLGFFF AMPSIFSLVC LTIGLYTLNS QTLEEEIHLS KKFPIEYAAY ASKVRRWV
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