| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2822 |
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| Symbol | prpB |
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| ID | 3520160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2957790 |
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| End bp | 2958680 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637285275 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_269534 |
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| Protein GI | 71279700 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAGTC AATTATCTGC AGGCGCAAAA TTTCGCCAAG CGTTAGTAAA TAACAAACCA
CTACAAGTTG TAGGCACAAT CAATGCTTAC AGCGCTATGA TGGCTGAGCA AATAGGTCAT
CAAGCCATAT ATTTATCAGG TGGCGGTGTA GCCAATGCCT CTTATGGTTT ACCAGATCTT
GGTATGACGT CATTGAATGA TGTTGTTGCT GACGTACAAA GAATTACCGG TGCTTCAAGT
TTACCTTTAC TTGTTGATAT CGATACGGGT TGGGGCGGTG CGTTTAATAT AGCTAAAACT
ATTCGTGATA TGGAAAAAGC AGGCGCAGCA GCTGTTCATA TTGAAGATCA AGTAGCGCAA
AAGCGTTGTG GTCATCGTCC AAATAAAGAA ATTGTTTCAA CAGAAGAAAT GGCTGACCGT
ATTCGCGCCG CTGTAGATGC ACGTATTGAC CCTGATTTTT TCATTATGGC CCGTACAGAC
GCTTTTGCTC AAGAAGGTCT AGAAGCGGCT ATTGAACGTG CTAAAGCATA CGTTGCAGCA
GGTGCTGACG GTATTTTTGC AGAAGCGATT CAAACAGAAG AGCATTATCG TGCTTTCACT
GAAGCTTTAG ATGTTCCTGT TCTTGCCAAT ATCACTGAAT TTGGTCAAAC AGAACTTTGG
AATAAAGAAC AATTAGGTGA GTGGGGTTGT GCGATGGTGC TTTATCCATT ATCAGCATTT
CGTGCCATGA ACAAAGCCGC TGAGTCTGTT TACAGAACAT TATTAAATGA TGGTGATCAA
AAAGCTGAAA TTGACAACAT GCAAACACGC ATGGATTTAT ATGACTACCT TGGTTACCAC
GATTATGAGC AAAAACTAGA TTCGTTATTT GCTGATGGAA AAAATAAGTA A
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| Protein sequence | MTSQLSAGAK FRQALVNNKP LQVVGTINAY SAMMAEQIGH QAIYLSGGGV ANASYGLPDL
GMTSLNDVVA DVQRITGASS LPLLVDIDTG WGGAFNIAKT IRDMEKAGAA AVHIEDQVAQ
KRCGHRPNKE IVSTEEMADR IRAAVDARID PDFFIMARTD AFAQEGLEAA IERAKAYVAA
GADGIFAEAI QTEEHYRAFT EALDVPVLAN ITEFGQTELW NKEQLGEWGC AMVLYPLSAF
RAMNKAAESV YRTLLNDGDQ KAEIDNMQTR MDLYDYLGYH DYEQKLDSLF ADGKNK
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