Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2818 |
Symbol | |
ID | 3521096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2949545 |
End bp | 2952106 |
Gene Length | 2562 bp |
Protein Length | 853 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637285271 |
Product | TonB-dependent receptor |
Protein accession | YP_269530 |
Protein GI | 71280628 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.141379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAATA AAAACATACA TGCCGCGCTA ATACCGATTT TACTCGGTGC AGCCAGCCAA ACAGCATTAG CTCAAGAACC AGCACAAGCA CAAGAAGAAG AAGTAGAGAA AATATCCATA GTCGGTAGCC GAGTGGCTGG CCGATCTGTC GAAGACTTAC CTGTGCCTGT TGATATTTTA TCAGCGGAAG CGTTAGCAAA TACTGGTCAG ACAGAAGTTG GCCGAATGCT CCAAGCCATT GCCCCATCAT TTAACTTCTC TAGCTCATCT ATTAGTGATG GTACCGATGC TTTACGCCCA GCAACATTAC GAGGCCTAGG TCCGGATCAA ACCCTAGTAC TGATTAATGG TCGTCGTCGT CACCAAGCCA GTTTAATTCA TATCAACACT TCTGTTGGCC GAGGCACAGC GGGTACTGAT ATGAATGCTA TCCCTGCAGC TTCAATCAAA CGTATTGAAG TATTACGTGA TGGTGCTGCT GCACAATATG GCTCTGATGC CATAGCAGGT GTTATCAATA TCGTACTTAA CGATGCCGAT GAAGGCGGTA AAGTAGCGGT ATCTTATGGT GAATATTCAG AGGGTGATGG TGAAACAACC AATGTAGACA TCTCTAAGGG CTTTAGCTTA GGAGATAATG GTTACCTTAA TACAACCCTT AACTTTAGAG ATCGTGGCTT TACTAATCGT GCAGGCTTGC ATGGCTCATG TCAATTCTCA GGATGTATTG AGCAGGCTAA TGGTGATTTA TTATTAGGCG ACCCTAGAGA AGCAACAGCA ACTCGTTCCA CCTTTAGAAT TGGTGATGCG GATGCCAGTC AGTTTGGTTT AACCATTAAT AGCGGTTATG AATTAGGTGA TGGTGAATTG TATGGTTTCC TTACTTATTC AAATCGCGAT AATGAATCAG CCGCATTTTT CCGCCACAAC AATAATAATG GCGGTAATGC CCCACTACAA GATGGCGATG CGACTATTCC AGCCGGATTT TTACCTAAAA TTAATACTGA AATAAAAGAC ATTTCTTATA ATTTTGGTTA TCAAACAGAA TTTTCAGATG GCTCGTCTTT AGATTTTTCT TATACCTATG GGCAGAACAA TATTGATTAT GTTACCAGTA ACACCATTAA CTCTTCTTTT GCTAACTCAT TACGTTACAG CTCAAGTTTA AGCGCAGATG AAATTAGAGC CTCGATTCCG CGCCAAGCGT CAGCATACGG ATTAGAGTTA TCACTGCAAA CATTAAACCT TGATTATACC CAAGACTATG AATACTTTTC ATTAGCCATG GGCGCAGAAA TTAGAACGGA TGAATTTAAA GTAACTGCCG GTGATGAATA TTCTTATCGT GACTATGATA CCGATGAATT AGGTAATAGT TTATTCCCTG ATGACCGCTC TGCCGGCACT CAAGGATTTG GTGGTACAGC GCCAATGCAA GCTGTAGATG AAACCCGTGA TGTCATCTCA TTTTATATTG ATGCTGAAAC TGAAGTTACT GAAGACTTAA TCGTCAGCGG CGCTGTACGT TACGATGATT ATGAAGGCTT TGGCGACAGT ACCAACTTCA AATTAGCCGC TAACTGGTCT ATCACTGAGG ATATTGCTAT ACGTGGTGCG ATGAGTACAG GTTTTAGAGC ACCATCAATG CAACAACTTT ACACTGACAA CATAAGTACT CAGTTCCAAA CAGATCCTGC TAATCCTGGC GGCGATCAAA TTGCCGTACA AGTGGGTACT TTTCGTAATG ACTCAAACCT AGCTAAAGCG ATAGGTATAC CTGAATTAAA AGAAGAAGAA GCCACTAACT TTAGTTTAGG GACCGTCATT AATATTACCG ATGATATTAA CTTAACCATC GACTGGTACT CAATTGATAT TGATGATCGA ATCGTATTAA GTAACTCCCT AGGTCAAGGT TTATCACCTG CTTTAGATGC GGCACTTATT GCATCCGGCG CTGGTGCAGG TCAGTTTTTC CTAAATGGTG CTGATACTGA AACGACAGGC ATTGATATCA TTGCTACATG GAATACTGAA CTACTCGGTG GTGACTTTAA TTTAACTGCT GCCGCAAACT TTACTGAAAC TGATGTGGTA AATATCTATA CACCACCAGA CAGTGCATTG GGTGGTATCG ATCCAAGTGA TGTATTTTCA GAGCAAGCCG TTTCTATTAT TGAAGAATGG CAACCACAAG ATCGTATTAG CTTAAGTGGT TTGTATACTA TTGGTGATGT AAGTATTAAT TTAGCCTTTA ACCGCTATGG TGAATATACA GTTACTGACG GAGGCACACA AACTTACGGT GCTGAAGTAT TAACTGACTT ACGTGTTAAC TATCAAGTAA CTGAGAGCTT ATCATTTAAC ATTGGTGGTA ATAACTTGTT TGATGTTTAC CCTGATGAAA ACACTATAGG TAACTCACGT TCAGGAACAA TAGTGGATGC AAGTGGCGAT GTTGTAGTAA GTAGCCCTGG CGTATTTACT TATTCACGTC GTTCGGCTCC TTTTGGATTT AATGGCGCAT TTTACTATGC AGGTGCTGAA TTTAAATTCT AA
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Protein sequence | MRNKNIHAAL IPILLGAASQ TALAQEPAQA QEEEVEKISI VGSRVAGRSV EDLPVPVDIL SAEALANTGQ TEVGRMLQAI APSFNFSSSS ISDGTDALRP ATLRGLGPDQ TLVLINGRRR HQASLIHINT SVGRGTAGTD MNAIPAASIK RIEVLRDGAA AQYGSDAIAG VINIVLNDAD EGGKVAVSYG EYSEGDGETT NVDISKGFSL GDNGYLNTTL NFRDRGFTNR AGLHGSCQFS GCIEQANGDL LLGDPREATA TRSTFRIGDA DASQFGLTIN SGYELGDGEL YGFLTYSNRD NESAAFFRHN NNNGGNAPLQ DGDATIPAGF LPKINTEIKD ISYNFGYQTE FSDGSSLDFS YTYGQNNIDY VTSNTINSSF ANSLRYSSSL SADEIRASIP RQASAYGLEL SLQTLNLDYT QDYEYFSLAM GAEIRTDEFK VTAGDEYSYR DYDTDELGNS LFPDDRSAGT QGFGGTAPMQ AVDETRDVIS FYIDAETEVT EDLIVSGAVR YDDYEGFGDS TNFKLAANWS ITEDIAIRGA MSTGFRAPSM QQLYTDNIST QFQTDPANPG GDQIAVQVGT FRNDSNLAKA IGIPELKEEE ATNFSLGTVI NITDDINLTI DWYSIDIDDR IVLSNSLGQG LSPALDAALI ASGAGAGQFF LNGADTETTG IDIIATWNTE LLGGDFNLTA AANFTETDVV NIYTPPDSAL GGIDPSDVFS EQAVSIIEEW QPQDRISLSG LYTIGDVSIN LAFNRYGEYT VTDGGTQTYG AEVLTDLRVN YQVTESLSFN IGGNNLFDVY PDENTIGNSR SGTIVDASGD VVVSSPGVFT YSRRSAPFGF NGAFYYAGAE FKF
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