Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2806 |
Symbol | |
ID | 3520191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2934660 |
End bp | 2936750 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637285259 |
Product | hypothetical protein |
Protein accession | YP_269518 |
Protein GI | 71279730 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAACA AGCCTCAACA TGGCTTTGCC AAAAAACCTT TAGCTGTAGG TATTGCTGCC GCGCTTTCAA TGTCGTTGTT AACTTCAATG GTTAATACTG CTCAAGCAGC AAGATGGGAG CTCGGTGATG TAGAGATCAG TTTTGATTCT ACTTTTAGTC TCGGCTCAAG CTGGCGAACA GAAGATAGAA ACTGGAATGA CAATATAGGT AAGTCTAACA ATGCCAATAG CGCCTTAGGC TTTGATAATA CTTACAGACC TTACTCTCCA CTCAATGTGC CTGTTAAAGA AGATGTTTGG AAAGGTGCTG GTGGTTATTC TACCAATGGT GATAACGGCA ATTTAAATTA TAATGCCGGT GAAAGTTTCT CCAAAATATT TAAAGGTGTT CATGAATTAG ATATTCACTA TCAAAATGTT GGTGTTTTTG TTCGTGGTAT GTATTTTTAT GATTATGCCA TGATGGATGA TGATAGAGCA TCCTCTAATG CGCTTACCGG TAATGTTTTC GATCCCTGTC GTGATAGCGA AGCGAAAAAA CAAGTCTGTC AAGATATCCG CCTACTCGAT GCTTATGTTT ATGGTGATTT TGAAATCGGT GAAATGCCAT TCTCAGTTCG TCTTGGTGAT CAAGTCATTA GCTGGGGTGA AAGTACGTTA ATTTCACATG GTATCAGTGA GATCAATGCT GTTGATATTG CACGTTTACG TGCACCGGGT GCTGAATTAA AAGAAGCATT TATTCCGGTT GGTTCCTTAT GGGGCTCATT GGGCGTTACA GATAACTTCA ACATTGAAGC CTTTTATCAA TACGCTTGGG AGAAAACTAT TTTACCACCA CCAGGTAGTT ATTTTTCGAC CAACGACTTT GCCGGTGACG GTGGTCAATA CAATAATGTT CAACTTGGTT TTGGTGGCAA TCCTGACATG AACTTAGATT ACCTAATGGC TGGTCTAAAT GAAATTGGTG AAGGAGTTCG AACAGGGAAA ATATCACCCA CGCAAGCTGC TGGAATGTAT GGTGCTTATG CTACTAATCT TACCTTAAGA GCACCAGGCT CTAAAGCTGA AAATGATCCT GATGATGGCG GCCAATATGG TTTGCGTTTA TCTTGGTTCT TACCTGAATT AAATGATACT GAAATAAGTT TGTATCATGT CAATTATCAT AGTCGTCGAC CAATATTCTC AGGCGTTACC GCAGATTATA GTGCTGCATC AATAGGCGGA GATATTGGAT ATCTTGTAGA AAATGAAATT AACGAAGGTA ACTATACTGA TTTAAATAGT TTCTCTCGTG TTGAGTTAGA TTATGTAGAA GACATTAAAA TGTACGCAAT GAGTTTTAAC ACAACCTTGG GTACAACAGC CTTTGCCGGT GAAGTAAGTT ATCGTCAAGA TGAGCCGCTG CAAATTGATG ATGTTGAACT ACTATTTGCT GCAGTTCCTC AGCAAGTTTA TAATTCAGGA AACCCTGCCG GCGCTGCGCT AAATGGTGTT TCGCAAATGG TTAATGCTGA TGGTAATCCT TTCGGTCCGG GCGAAACAGC TAACGGTTAT ATTTTATCTG ATACTATGCA AGCGCAGATG ACATTAACAC ATCTATTCGG GCCAACGTTT GGCGCGAGTC AATTAGTAGG ACTCATTGAG GTCGGTGGTA TCAATATTAA TGATATGCCC GAGCAAAGTG AATTACGTTT AAATGGCCCA GGCACCGCAC GCAGTGGTGG TGTTAGTAAT GGTGCTCCAG GTTTAAACAA AGCGTTACAA GATGGTGTTG AGACTAACCC ATTCCCAACA GAATTTGCTT GGGGTTATCG TGCAATAGCT AAATTTGAAT ATACTAACGT TATCGCTGGT ATCAATATAG CGCCACGTGT TGTATTTTCC CACGATGTTA AAGGTATTAC ACCTGATCCA TTGTTTATGT TTATTGAAGG CAGAAAGTCA ATGGCGCTGG GAGTAACCTT TGATTATCAA AGTCGTTGGT CAGCAGATTT GAACTATAAC AGCTTCTTCG GTGGTGTTGG CACCACTAAT AAGATGGAAG ATCACGACTA TGTTTCTTTC AGCGTAAAAT ATTCAATCTA A
|
Protein sequence | MKNKPQHGFA KKPLAVGIAA ALSMSLLTSM VNTAQAARWE LGDVEISFDS TFSLGSSWRT EDRNWNDNIG KSNNANSALG FDNTYRPYSP LNVPVKEDVW KGAGGYSTNG DNGNLNYNAG ESFSKIFKGV HELDIHYQNV GVFVRGMYFY DYAMMDDDRA SSNALTGNVF DPCRDSEAKK QVCQDIRLLD AYVYGDFEIG EMPFSVRLGD QVISWGESTL ISHGISEINA VDIARLRAPG AELKEAFIPV GSLWGSLGVT DNFNIEAFYQ YAWEKTILPP PGSYFSTNDF AGDGGQYNNV QLGFGGNPDM NLDYLMAGLN EIGEGVRTGK ISPTQAAGMY GAYATNLTLR APGSKAENDP DDGGQYGLRL SWFLPELNDT EISLYHVNYH SRRPIFSGVT ADYSAASIGG DIGYLVENEI NEGNYTDLNS FSRVELDYVE DIKMYAMSFN TTLGTTAFAG EVSYRQDEPL QIDDVELLFA AVPQQVYNSG NPAGAALNGV SQMVNADGNP FGPGETANGY ILSDTMQAQM TLTHLFGPTF GASQLVGLIE VGGININDMP EQSELRLNGP GTARSGGVSN GAPGLNKALQ DGVETNPFPT EFAWGYRAIA KFEYTNVIAG INIAPRVVFS HDVKGITPDP LFMFIEGRKS MALGVTFDYQ SRWSADLNYN SFFGGVGTTN KMEDHDYVSF SVKYSI
|
| |