| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2758 |
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| Symbol | lolA |
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| ID | 3521643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2871144 |
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| End bp | 2871878 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637285211 |
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| Product | outer membrane lipoprotein carrier protein LolA |
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| Protein accession | YP_269470 |
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| Protein GI | 71281172 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.141444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAACCA ATTTTATAAA TCAGTCATTT TTTCGTAAAT TCGCTTTGAC CAGTATATTA
CTGCCCGTAC TGAGTCTATC TCACTCAATG GCTTATGCTG TCGAAACACC GGTGAACACT
GATAATGCAA CAGCTACTTT ATTGTCACCA TCAAACGAAG CAAAAGAACA CTTAATGACT
AAGCTAGGTA AATTAGCTTT TTTTAGTGCA GATTTCAGCC AAAAAATTCT TGATAGCCAA
GGTGAATTAT TACAACAAGG TTCGGGAACA CTTGCGATTA GCAAGCCCAA TCTGGTCAAT
TGGAAAAACA TAACACCGGA TGAAACCTTA ATTATCAGCG ATGGCAATAC CTTGTGGTTT
TATGACCCGT TCATTGAACA AGCCAGTGCT TATAGTTTAG CTAAATCAAT TCACAATACG
CCTATTTTGT TGCTAACCAG TGATGAACCT CAACTATGGC AGCAGTATAA TGTTATCCAA
CAGAACGACG TTGCTGCAAG TGGCTTACGT TTTGTCGTGA TGCCAAAAGA TGAAAGCAGT
CAGATTAAAA AGCTCACGCT TACTTTCAGT GAAACTGATA ACAATGCTGT GCAGTTAAGT
GAATTTTCTT TTCAAGATGC TACAGGGCAA ATCAGTCAAA TCAGTTTAAG TAAATTTAAC
AGTAAGACTG AGCCTGCTGC CACGTTATTT AGCTTTAGCT TGCCTGAAGG TGTAAGACTT
GAAGACAAAC GATAA
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| Protein sequence | MQTNFINQSF FRKFALTSIL LPVLSLSHSM AYAVETPVNT DNATATLLSP SNEAKEHLMT
KLGKLAFFSA DFSQKILDSQ GELLQQGSGT LAISKPNLVN WKNITPDETL IISDGNTLWF
YDPFIEQASA YSLAKSIHNT PILLLTSDEP QLWQQYNVIQ QNDVAASGLR FVVMPKDESS
QIKKLTLTFS ETDNNAVQLS EFSFQDATGQ ISQISLSKFN SKTEPAATLF SFSLPEGVRL
EDKR
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