Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2649 |
Symbol | |
ID | 3522306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2753184 |
End bp | 2754470 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637285103 |
Product | glucose/galactose transporter family protein |
Protein accession | YP_269363 |
Protein GI | 71281834 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000985214 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGGCA ATATTCCAAC AGCATCAGTA AGTCATCAAA CAGGAGCCGA TGAAAGTTAT CATTTTGCTT TTGCTTCGAT GACAACACTC TTTTTCATTT GGGGTTTTAT TACCGCCTTA AATGATATTT TAATACCACA CCTTAAGGCA GCATTTGACC TTAATTACGT GCAAGCAATG TTAGTACAGT TTTGCTTTTT TGGCGCCTAT TTTATTATGT CGCCGATTGC GGGAAAAATA ATCAGTAAAA TTGGTTACTT AAAAGGCATT ATTACGGGAC TGTTAACTAT CGCCGCAGGT TGTAGTTTGT TTTATCCTGC CGCAGAAATT GGTGTGTATT GGGTGTTTTT AGCGGGACTA TTTGTACTTG CTTCAGGCAT TACTATTTTA CAAGTTTCTG CTAACCCTTA TGTGGCATCA CTAGGTAAAG AAAAAACGGC GGCCAGTCGT CTTAACTTAG CACAAGCGAT TAATTCATTA GGTCATACCC TTGGGCCAAT ATTTGGTAGT GCGTTAATTT TTGGTGCGGT AGCCCATACA GAGGTGATTG ATGCAAAAAG CGTACAATTA CCTTATTTAT TACTGGCTGG AGCAACAATA TTAGTTGCGA TAGGTTTTAA GTTTTTACAT TTACCCGTGA TACAGTCTAT TGCCGAAACG CCTGACGATA ACGCGAGTGA CGGTAAATCA ATTTGGCAAC AAAAACCACT GCTTTTAGGT GCGCTTGGTA TCTTTGTATA TGTTGGCGCT GAAGTATCTA TTGGCAGTTT TTTAGTCAAT TATTTTACCC AAAAAGATAT TGCTGGTCTC ACAGAAAAAC AAGCCGGTGA TATGGTTTCA TATTATTGGG GCGCTGCAAT GATTGGCCGT TTTGTTGGTG CTTACTTAAC GCGTATTATC AAGCCAAGTT ATGTACTTGC CTGTAACTCC ATTCTTTCTA TGACATTGCT TATTGTCACT ATGTCGAGTA GTGGTCACTT CGCCATGTGG GCCGTGATTT CGGTTGGTTT CTTCAATTCT ATTATGTTCC CAACTATTTT TACCTTAGCC ATTCGTGGCT TAGGACCGTT AACGTCTAAA GGTTCAGGTT TGTTATGCCA AGCCATTGTT GGTGGAGCTA TTCTACCGTT AATTCAAGGA TATGTTGCAG ACATTAGCTC AGTTCAAGCA AGTTTTATTG TGCCTGCATG CGCTTATATC TATATCTTTG GCTATGCACT TTACACGGCA AAGTATCGTG CAAATCAAAA AAATGAAATC ACCACTCCAG TAGAGGCTAA TCTATGA
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Protein sequence | MAGNIPTASV SHQTGADESY HFAFASMTTL FFIWGFITAL NDILIPHLKA AFDLNYVQAM LVQFCFFGAY FIMSPIAGKI ISKIGYLKGI ITGLLTIAAG CSLFYPAAEI GVYWVFLAGL FVLASGITIL QVSANPYVAS LGKEKTAASR LNLAQAINSL GHTLGPIFGS ALIFGAVAHT EVIDAKSVQL PYLLLAGATI LVAIGFKFLH LPVIQSIAET PDDNASDGKS IWQQKPLLLG ALGIFVYVGA EVSIGSFLVN YFTQKDIAGL TEKQAGDMVS YYWGAAMIGR FVGAYLTRII KPSYVLACNS ILSMTLLIVT MSSSGHFAMW AVISVGFFNS IMFPTIFTLA IRGLGPLTSK GSGLLCQAIV GGAILPLIQG YVADISSVQA SFIVPACAYI YIFGYALYTA KYRANQKNEI TTPVEANL
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