Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2623 |
Symbol | |
ID | 3521490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2726810 |
End bp | 2728165 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637285077 |
Product | metallo-beta-lactamase family protein |
Protein accession | YP_269337 |
Protein GI | 71281021 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTA CATTCTTGGG TGGTACTGGA ACAGTCACAG GTTCAAAATA TTTTGTAGAA ACAAGTACCA CCAAAATTTT GGTTGATTGC GGATTATATC AAGGTTATAA ATGGCTCCGA GCTCGCAACC GAGAGCCATT ACCCCTAGAT TTAAAAAGCT TAGACGCCAT AGTACTTACC CATGCACATC TAGATCATTC AGGATTCATT CCCGCTCTTT ATAAACAAGG CTTCCGTGGC CATGTTTATG CTCATCAAGC TACGATTAGT TTATGTTCTA TTTTGCTACC CGATAGTGGT CATATCCAAG AAGACGATGC AAAATTTTAT GGGAAACACA AAATAAGTAG ACATGAAAAT CCGGAACCTT TATATGACAA AGCAACAGCT GAGGCATGTC TATCCTTGTT TAAAGCAGTG GATTTTAATG AAGAATTTAA AATTGGCGAT ATAGAAATAG AACTGCAAAG TGCTGGGCAC ATATTAGGAG CCGCGAGTGT GATCCTAAAA GCTGATGGGA AACGTGTGGG ATTTTCAGGT GATGTTGGCC GTCCCGATGA TATTATAATG TATCCACCGA AACCACTTCC TCCAGTAGAT TTGTTACTAC TTGAATCAAC TTATGGTAAT CGACTACATG ATAAAGAAGA TGCTTTTGAA CAGCTTGCTG AAATTGTAAA TTCAACAGCT AAAAAAGGAG GCGCACTTCT AATACCGAGT TTTGCCGTAG GTAGAACCGA AGCAGTGCAA CATATGCTGG CTTCGTTGAT GAAAAAAGAA CTTATTCCTA AGTTACCTGT TTATCTTGAT AGTCCCATGG CGATCAATGT TTTCAATATT TATTGTGAAC ATTTTGATTT GAATCGGCTG AGCAACGAAG AATGCCTTGA AATGTGCAAT GTTGCAACGT TCACTAGAAC AGTAGATGAA TCAAAAGCAT TATCTGAATT GATTATGCCT CATATTATTA TAGCAGGCAG CGGCATGGCG ACTGGTGGAC GAATTTTGCA TCATCTAAAA CGCTTATTAG GTGATTATCG TACCACTGTA TTATTCACAG GTTACCTTTC TGGTGGTACC CGAGGAGCCA AAATGTTGGC TGGAAAGGAT AATGTAAAAA TACATGGAAA GTGGTTGCCA GTTAAAGCAA GAGTTGAAGT ATTAAATGGA TTATCGGGAC ATGGTGATTA TGAAGATATA ACCCAGTGGT TACAGATTTC AAAATTACAT CCTAAAACTA AAGTTCTATT AGTCCACGGT GAGCCCGAGG CTAGTGAGTC GATGCGTGAT CATTTAATGC AACATACTCA GTTCGATGTT GATGTAGCCA AATATCATGA AATATTAAGG TTATAA
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Protein sequence | MNITFLGGTG TVTGSKYFVE TSTTKILVDC GLYQGYKWLR ARNREPLPLD LKSLDAIVLT HAHLDHSGFI PALYKQGFRG HVYAHQATIS LCSILLPDSG HIQEDDAKFY GKHKISRHEN PEPLYDKATA EACLSLFKAV DFNEEFKIGD IEIELQSAGH ILGAASVILK ADGKRVGFSG DVGRPDDIIM YPPKPLPPVD LLLLESTYGN RLHDKEDAFE QLAEIVNSTA KKGGALLIPS FAVGRTEAVQ HMLASLMKKE LIPKLPVYLD SPMAINVFNI YCEHFDLNRL SNEECLEMCN VATFTRTVDE SKALSELIMP HIIIAGSGMA TGGRILHHLK RLLGDYRTTV LFTGYLSGGT RGAKMLAGKD NVKIHGKWLP VKARVEVLNG LSGHGDYEDI TQWLQISKLH PKTKVLLVHG EPEASESMRD HLMQHTQFDV DVAKYHEILR L
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